AMCG00018825


Basic Information

Item Value
gene id AMCG00018825
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22047302 ~ 22074621 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018825
AGCGATGGTACAGAAAGGTGTATCCTTCCATAGTGCAAAGCCCAGCAACTCTCTACTGTGGGAGGCAAACTTGCAGACAGGAGATGAGTGGAAGTACGGGACCACGACAGTCTTCTGCCAGAGAAAGGCCGCCCTGTCGGGAAACAGGCAACTAGACTTTGAAACAGAGGAAttcagcagccaatcagagagcCAGGTGATCAGCTGGCAGCTGGAATACCCTGAATCAACCAAGCCTGGGGACGAGGGGGTCCTGACAGTCTACACCACACAGAGGGACTTTGTGGGCCTGGCTCCCCTGGTCATGGACACCGAGATCTTGAATACGGCCGTGCTGACGGGGAAGAAGGTGGTGGTGCCCGTCAGGGTTGTGGCAGTGGAGGACAACGGCTCGGTGACAGATGTGTCTGACCTGACTGACTGCAGGTCCACAGATGAAGAGGTGCTGAAGGTGTCCGACAGGTGTGACTATGTCTTCGTGAACGGGAAGGAGATGAGGGGGCGGGTGAGGATGGCAGTGAACTTCACCTATGCCTACCTCAGCGCCCAGCTGGAGATGACGGTGTGGATCCCCCGCCTCCCTCTGCAGATAGAGGTGTCTGACACAGAGCTGAGCCAGGTCAAGGGCTGGAGGGTGCCCATCGCCACCAATAAGAGgccCAGCTGGGAcagcgaggaggaggaagacgacCGCAAGGGAAAAGGCTGCATGCTGCAGTTCCAGCACGCTCTGGTGCGGGTGCTCACACACTTTGTGGCGGAGCAGGCAGACCCACGGGAGCAGCTGGCCTACTTCTTAGGCTCAGACTGGCAGGTGGACATCACGGAGCTGGTCAGATACTTCCTGAAGGTGGAGGAGCCGCGGATCGCCAGGCTGCAGGCCGGGAGGGTGTTAGCAGGCCGTGACGTGGGAGTGACTACCATCCAGGTGCTGTCCCCTCTGTCAGACTCGATCCTGGCGGAGAAGACGGTGACGGTGCTGGATGACAAGGTGGCGATCACAGAGCTGGGGGTGCAGCTGGTGACGggtctctcgctctccctccaGCTCAGCCCGGGCAGCAACAGGGCCATCGTTGCCACAACAACCACCCAGGAGCTGCTGCACAGCCCCAAACAGGAGGCTGTCATCAGCTCTTGGATTCAGTTCAGCGACGGCTCGATGACACCGTTGGACATCTATGATTCCACCTACTATGCCCTGACGGTGACTTCGCTGGACGAGGAGATGGTTTCGGTGCAGAGGGACCCCCAGGCTGGCGTCCCGGTGGTGatggcagagggagaggggcagggggcGTTGGTCAAGGTGGAGATGGTGATCAGCGAGGCCTGCCAGAAGTCCAAGCGGAAGAGCATGCTGGCCGTGGGCACCGGAAGCCTCCGGGTCAAATTCCAACCCGGGCCCCGGCGCAACAAAGAGGACAGCAACAACGACTACGGCAACGATGGAGAGGAGCTGGAGAAGAGGGAGCCCAAACAGATGACCCCCAGGCAGGGCATGACGGGCACGGACGGACGTCTCTACGGTAGCTCTATGTCGGACCAGGAGGAAAGCGCAATGAGGAAGATCACCACCACGGTGAAGTCTGTGGTGAGGGATGTGGCCATGGGCAGCATCTCCAGCAGCTCCGGACGTGATCACAGCAACCTGGTGGACTACACGAACTTCCCCTCCCAGGTTGACATCCCCAGGAACAACGGTGCAGTGATGGAGAGCGACCTGGCACAGACCCCAAGGGCGCTGACGGACCTGGAGATCGGCATGTACGCCCTGCTGGGGGTTTTCTGTCTGGCCATCCTGGTCTTCCTGCTGAACTGTGTCTCCTACTTGCTGAAGTTCAGACGCAAGCAGGCCCCAGCGCAGGGCCAGGAGAGCGTGAGCCACATGCACGACTGGGTGTGGCTGGGCACGGACGCCGAGCTGGTGATGAACGTGTCAGGGAGCGCGTCGCAGCATGAGAAACACAAGACCACCGTCATAGACATTGGGCTGGGCCTGGAGAATGGGGCCAACCTGATAGGTGGGCTCTCGCAACAAAGCAACTCATTATCCAGATCCATGGAGTCCCTCAGAGCAAAGCACAAAAGTGAGTCCCTCAACTCCCCCACGACCAAGAGGAAGAGAGTCAAGTTCACCACGTTCTCCTCCATTGCGGCAGACCACCGCCGCCCATCCACTGACTCAATGCTGAAGGACCACGAGCAGGACATTAACTGGGTGGGCAAAGAGGAGAACTGTGTGGAACCTAAATTACTTAATGGTGAATCTCTGGACCATTTA

Function

GO: NA

KEGG:

id description
K17599 TMEM132; transmembrane protein 132

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018825 True 2284 mRNA 0.59 7 22047302 22074621

Neighbor

gene id symbol gene type direction distance location
AMCG00018826 NA coding upstream 10697 22030200 ~ 22036605 (+)
AMCG00018821 NA coding upstream 303563 21715850 ~ 21743739 (+)
AMCG00018823 NA coding upstream 355194 21691311 ~ 21692108 (+)
AMCG00018806 rflna,LOC106585519 coding upstream 1135225 20896914 ~ 20912077 (+)
AMCG00018801 atp6v0a2,LOC106580324,LOC106584979 coding upstream 1324188 20706497 ~ 20723114 (+)
AMCG00018828 NA coding downstream 16082 22090703 ~ 22091323 (+)
AMCG00018829 NA coding downstream 16725 22091346 ~ 22091618 (+)
AMCG00018827 NA coding downstream 40989 22115610 ~ 22138293 (+)
AMCG00018834 NA coding downstream 326880 22401501 ~ 22422814 (+)
AMCG00018833 NA coding downstream 366182 22440803 ~ 22449329 (+)
G118885 NA non-coding upstream 365579 21681320 ~ 21681723 (+)
G118863 NA non-coding upstream 624532 21370910 ~ 21422770 (+)
G118771 NA non-coding upstream 1115898 20922368 ~ 20931404 (+)
G118644 NA non-coding upstream 1426755 20607648 ~ 20620547 (+)
G118645 NA non-coding upstream 1441205 20604704 ~ 20606097 (+)
G118999 NA non-coding downstream 472651 22547272 ~ 22547691 (+)
G119005 NA non-coding downstream 483592 22558213 ~ 22558419 (+)
G119006 NA non-coding downstream 486441 22561062 ~ 22561280 (+)
G119007 NA non-coding downstream 487931 22562552 ~ 22562810 (+)
G119008 NA non-coding downstream 489749 22564370 ~ 22564707 (+)
AMCG00018820 NA other upstream 149602 21848370 ~ 21897700 (+)
G118815 NA other upstream 858056 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 1274716 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 1352108 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 1443987 20601956 ~ 20603315 (+)
G119507 NA other downstream 3159461 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 3391470 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 3604056 25678677 ~ 25718426 (+)
G119762 NA other downstream 4385999 26460620 ~ 26461227 (+)

Expression


Co-expression Network