AMCG00018828


Basic Information

Item Value
gene id AMCG00018828
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22090703 ~ 22091323 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018828
ATGGGTCATTCCACAGCGTGGATCGTCTTCAATGTCATTGCCGACTGCATCTTCATCTTGGACCTAGCTTTGAATTTCCGGACCGGCTACACCAATGAAGAGGACGTCGTAGTTCTGGGTCTGAGGCTCATCCGCAATCGTTACCTTAAGTCATGGTTCATCATGGATTTACTCGCAGTGACAGCCGTGAACTATTGCTTTCTGATAAGCAGAGCTGTGGGGGCCCTCGGACCTTCCGCAGCCGGATACAGCGGCGTGCGCATAGTGCGCATGATGAAGATGATGCAGCTGCTCGCCTTGTTGCGCTTATTCCGCCTGTCTCGGCTGCTGCGCTACGCCCGCTACTGGGAGGAAACGCACAGCTGGGACGTCGGCGGGATCGACGTGGTCCTGCGCTCCGTCTTCGCCCTGCTGCTCATCTTCGTTATCTGCCACTGGAATGCCTGTTTCCGGTTCCTGGCCGCGGATCTGATGGGATTCGAGGGCAACACCTGGGTGGCTCTGGATGGCTTAAATCGACCAGCCGATCAGCCCGCAATACACGAAGGCGATGTTTCGGGCCCCGTGCCACATCATGACTCTGGATTATGGGTCAACTGGGATCCCAAAAGTGACTGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018828 True 621 mRNA 0.56 1 22090703 22091323

Neighbor

gene id symbol gene type direction distance location
AMCG00018825 NA coding upstream 16082 22047302 ~ 22074621 (+)
AMCG00018826 NA coding upstream 54098 22030200 ~ 22036605 (+)
AMCG00018821 NA coding upstream 346964 21715850 ~ 21743739 (+)
AMCG00018823 NA coding upstream 398595 21691311 ~ 21692108 (+)
AMCG00018806 rflna,LOC106585519 coding upstream 1178626 20896914 ~ 20912077 (+)
AMCG00018829 NA coding downstream 23 22091346 ~ 22091618 (+)
AMCG00018827 NA coding downstream 24287 22115610 ~ 22138293 (+)
AMCG00018834 NA coding downstream 310178 22401501 ~ 22422814 (+)
AMCG00018833 NA coding downstream 349480 22440803 ~ 22449329 (+)
AMCG00018832 crkl,LOC106566436,LOC106563168 coding downstream 363916 22455239 ~ 22460417 (+)
G118885 NA non-coding upstream 408980 21681320 ~ 21681723 (+)
G118863 NA non-coding upstream 667933 21370910 ~ 21422770 (+)
G118771 NA non-coding upstream 1159299 20922368 ~ 20931404 (+)
G118644 NA non-coding upstream 1470156 20607648 ~ 20620547 (+)
G118645 NA non-coding upstream 1484606 20604704 ~ 20606097 (+)
G118999 NA non-coding downstream 455949 22547272 ~ 22547691 (+)
G119005 NA non-coding downstream 466890 22558213 ~ 22558419 (+)
G119006 NA non-coding downstream 469739 22561062 ~ 22561280 (+)
G119007 NA non-coding downstream 471229 22562552 ~ 22562810 (+)
G119008 NA non-coding downstream 473047 22564370 ~ 22564707 (+)
AMCG00018820 NA other upstream 193003 21848370 ~ 21897700 (+)
G118815 NA other upstream 901457 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 1318117 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 1395509 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 1487388 20601956 ~ 20603315 (+)
G119507 NA other downstream 3142759 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 3374768 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 3587354 25678677 ~ 25718426 (+)
G119762 NA other downstream 4369297 26460620 ~ 26461227 (+)

Expression


Co-expression Network