AMCG00018845


Basic Information

Item Value
gene id AMCG00018845
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22711692 ~ 22719425 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018845
atcaaatttaaaaataagccCTGCTCAGCAAAGATACCTAACAGAGTGTGACAGTGACAGGGAGACAGATACATGGTTTGCTCTCCTCCACCCCTTTCTTCAGATTCAGACTATAAAACCAGCACACTTGCATGCATCTTGAAACAATTCCCTCTACAATCATTCctgaagacagacagacggtGAAGATGATGGACACCACATTGACTGACCTGatgaattACTGGAGGCTTATGCTGTTAACTGTCGTGCTAGGAATCGGGGGATCATTTCAATATGGAATTCAAGTGTCTATCATGGCTTCTCCCTCAGAACACATTCAAAACTTTGTGAACCAGACTTGGATGGCTCGGTATGGGGAGCCTGTCAGTGAATCCACACAGAAACTCATGTGGTCCTTCATTGTGTCCATCTTCAGCCTGGGGGGCTGGCTGGGTGCTATCAACAGTGGTACAATCCCAGTCATCTACGGCAGAAAGAAATGTCTGCTCTTCAATAACGTGGTGGCGATCGTGGCCGCGGTGCTGATGGGGTTCAGTCGCATGGCGGGCTCCTTCGAGATGATATTGCTGGGAAGGATTCTGTACGGATACAACGTGGGACTTGGCCTCAGTGTACATCTTATGTACTTGGGTGAATGTTCGCCAATTAAACTACGAGGCTTCCTGACCCTGTCCAGTGCTATCTTCATTGGTTTAGGGAAGGTTATGGctttaaaggtGCTCTGGGGTAACGTGGAGACGAAGCTGGAGCTGGAGGATATGACTAAAGAGCGGGAAACGATGAAAGGGGAAAAGGCCAAGTCAGTGTGGGATGTCCTGACATCACGCTCTGTGCGATGGCAGCTGTTGACCTTAGTCATCCCCTGTGGTCTTGTCCAGCTCTGTGGAATCAGTGCGATCTACTTCTATGCTTTTGATATATTTCGTGAAGCTGGAGTCCCAAAAGATCAGATGCACTACCTCTCCATTGGAATTGGTACAGCTGAGCTAGTCACCTTAATACTATGTTCGTTCCTGATCGATCGCACTGGCAGGAAGTGGCTGATGTCGTTCGGCTACCTTGCCATGGCAGTGCTGATGGGGATTCTCGTGGTGATGCTGTCTTTACAGgatAACTACAGCTGGATTCCATACTTCAACATTGCTCTCATATTCTCTGCAATCTGTGTTTTTGGACTGGGTCCTtctgGAATAACGTTGACCCTCCCTGCTGAGTTGTTCCTTCAGGCTTGGAGACCCTCTGCGTACGTCATTAGTGGCACATGTAACTGGGTCGGTCTGTTCCTCATTGGGATGTTCTTCCCTTACGTAGCGGATGCGATGGGCCGGTTCTGCTTCCTGATCTTTGTGGCCTACTGTGTTCTCAGTGCAGTGTTCATGCTGGTGTTCATTCCTGAAACCAAAGGCAAGACCATGGTAGAAATTATGGAGGACTTCAACAAACTCAATTTTAAGGGCAGGGGGGTGGACACAGAGAAAGCAGATTTGGTCCTCGCCACCAAGCTTTGAGAACATCCaacattattagttttttttttttttttttctacatgcAGGGctaactgaaattaaatgctttttgtcaGGGTGTGAATTCTTAAACATACAAGTACcaatatgtgaaaatgtaaaacctttATCAGTACTGGGAAATCTATTGtaagcactttgtttttgttatagtaatatgctgtatataaccagacatgctttttgtttggttgtgaTTACTGCATTCATCTTTCTTCGGGctagagttttatttttttaaatgtctgaaaatgaaaaggattGTAAATGAGAACTGTACATTCTGAGTatttttgagaaaatatatcaaaGATGTTTTATGGTTCAATGGTCTCATacctgttaaatatatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018845 True 1887 mRNA 0.44 11 22711692 22719425

Neighbor

gene id symbol gene type direction distance location
AMCG00018847 NA coding upstream 18876 22684877 ~ 22692816 (+)
AMCG00018837 NA coding upstream 51899 22651139 ~ 22659793 (+)
AMCG00018838 derl3,derl2,LOC107667536,LOC107602852,LOC105014174 coding upstream 75641 22630545 ~ 22636051 (+)
AMCG00018836 NA coding upstream 84194 22604351 ~ 22627498 (+)
AMCG00018832 crkl,LOC106566436,LOC106563168 coding upstream 251275 22455239 ~ 22460417 (+)
AMCG00018848 NA coding downstream 11303 22730728 ~ 22742264 (+)
AMCG00018849 NA coding downstream 24584 22744009 ~ 22752505 (+)
AMCG00018846 NA coding downstream 43653 22763078 ~ 22766026 (+)
AMCG00018851 NA coding downstream 72852 22792277 ~ 22798365 (+)
AMCG00018854 NA coding downstream 80628 22800053 ~ 22807032 (+)
G119071 NA non-coding upstream 44551 22666892 ~ 22667141 (+)
G119016 NA non-coding upstream 132356 22579051 ~ 22579336 (+)
G119015 LOC106927871,LOC103148411 non-coding upstream 133979 22577501 ~ 22577713 (+)
G119014 NA non-coding upstream 134732 22576722 ~ 22576960 (+)
G119013 NA non-coding upstream 136002 22575459 ~ 22575690 (+)
G119100 LOC106566253 non-coding downstream 46126 22765551 ~ 22861808 (+)
G119177 NA non-coding downstream 259846 22979271 ~ 22982799 (+)
G119178 NA non-coding downstream 275551 22994976 ~ 22995190 (+)
G119231 NA non-coding downstream 375141 23094566 ~ 23108600 (+)
G119234 NA non-coding downstream 390176 23109601 ~ 23111520 (+)
AMCG00018820 NA other upstream 813992 21848370 ~ 21897700 (+)
G118815 NA other upstream 1522446 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 1939106 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 2016498 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 2108377 20601956 ~ 20603315 (+)
G119507 NA other downstream 2514657 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 2746666 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 2959252 25678677 ~ 25718426 (+)
G119762 NA other downstream 3741195 26460620 ~ 26461227 (+)

Expression


Co-expression Network