AMCG00018850 (gucd1,LOC106585462)


Basic Information

Item Value
gene id AMCG00018850
gene name gucd1,LOC106585462
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 22862980 ~ 22870773 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018850
CTTTACGTGTGATTTAAAACCATAATCAAAGAACCTGGGTAGGGGGCAGTGTAGGCGAAacgagtgtttttttttttttaacaaaaatcgAAAGAGGAAGTTGCGCATCTCACCGGGAGCCCGACGGCAGTCGAGAGCAGCCCTAGCAGGCGACCGAAATAAGGTCGTGACTATGGATCTAAACATTGTCGCACAACAGACAGGACGGAGCCCGTAGTAAAACCAGTGTTTCCCCTTAAAGCACGAAGTTTGTAGGAACCTTACAGGATTGATCAGAATTGgaaaaatacagcacagaatGACAGATGATGCTGTTCAACTAAAAGTACCTGTCATTCGGCAGCTGTATCACTGGGACTGTGGACTGGCCTGCTCTAGGATGGTTCTCAAGTATCTCCATCCAGTGAGTGAAGAGGAGTTTCAGAATGCCTGCTGGGAGCTGAAGCTGACGGAGAGTGTGTGGACTATTGACCTGGCCTACCTCATGAGCCACCTGGGAGTGAGGCACCGATTCTGCACCCAGACCCTTGGAGTGGACAAGGGCTATAGAAACCAGtcattttacaaaaagcattttgatACCGAAGAGGACCGAGTGAACGAGCTTTTTAACAAGGCGGAGAGCAACGGAGTAGTGGTGAATAAATGCTCCGTGACAATGCAGGAGATCCAGAATCATCTGGCTGAAGGCCATGTGGCGATCGTGCTGGTGAACGCAGTGCTCCTGGTCTGTGAACACTGCTCCACCCCGGTTAAGTACTGCTGTTTCCTGCCTGTGGGCCAAAAGTGCTTCTGCAGGAAGCCGGACTACCAGGGCCATTTTGTGGTAGTGTGTGGATTCAGCAACACCACCGACTCCATCTTCTACAACAACCCTGCCTACTCTGACCGAGTGTGTTGCACCAGCATTAGTAATTTCGAGGAGGCGCGGATGAGCTATGGGACAGATGAAGACATTCTTTTTGTCTACAAGGAGAGCTGATAGCGGCAAGTGACCGACACACAAGAGCACTACACACTCACTGTGGCCGCTTTAGTGTTCGTCTGCAGTCCTGGACATCAAGAGATACGTAGCATCCATCTTTACGTTGGTGTAGCATGGTGTCTTCAGACTGTGTTCTCTCCCCCTGTGGACAGATGACTGGTGGCCAGAGAACTCATCACTGTGCGTTTTGTTtcttccccttttcttttcacacagcAGAATGTTTCAAAAGCCATGTACTTCAATCCATGTACTGCAGGACAAAATAagggatttttgtttgtttttgtaaacgGGGGAAAAAAACCCACTAGAATTAGCTTGCCGTCAAATGAGACAGAAGTAGAAAAGGTGGAAGATTTGACGCAAGTTGACGATTTAGTTAGCATCTGTGCAGAATAGAGTAGGACACAGCTGAGTTTAGGAAAATCCCCAAATCTGTGTACAATGCAAGATGTACATACCCTTGCTTTCCATCAGTTTTGGTTAAACCCAAAGGGGTGTGACAAAGCCAGTGTTTAAAGCTAATGTTAGTGATTAAAAGCAGTGTTAACTACaggctgcttctctctctctctctctctaaaaaaaataaatgtatgtaacttatattttattctagaaatacaaaattaaacatcccCTGTGCTATAGTACCAGGCAGTTGTATGAAAATCAGATCAGTGGTCCATGAGAATGGTCTGGAACAGTATTGCTACCAGGACCCGTTTTAAACATTTGTGCACACAGATTATATTCCAAACCCATCAGTTTTTCTAGGCTGAACAGAGTAGTGTTGCTGGGCAGCACAAACAACGTggttctctttgtttttctagaAATTTCCCTCCAAAACATAAAGCAATGTCAGTATTCATAAGCTGGCATTTTCTAATGACAGGCTTCTCCTCACCTCACAGGCCTGTCTACATAATTCAGCTTACAGTTTCCCCCAGTCTTTGGTCTAGTGGAGGAATTTTGGAATCACATGtatatttgttataatttatAGGAGGTACATCTGCATAGTCTGTCATCgttgttatcattattaatgaAGTCTTAACTATACCTAGTTATTCAAAAAGGGCTTATTCCTACAGTGATGAATGCTTGATATTATTTATGGGCAAAAGGGTTAGgcctagactaaatcaaaactttaaacacATCTGCCAGTTGCAAGTTTCCAGTGCATTGGTAGGTGTCCACTGGGTAGAATAGCATGAGTATTGGGTTTTTACTTTGCAACTGAAGGGTATGTTAAAGGTATGATTTTATCTGGGCCTTATATTATGTTTGTATGctgcttttttgttattgtatttgtaaaactcTTCCAAATGTGTGtctattatgtatatatgtgtctTTTACAGGAAGCCCACAGTAGATTGTAGCTTTATGTTGCATTATTGTTCAACTCGGAATTGCTATACCTGTGGAAAAGTAGAGCGTTTCTTTGTGTAATGGCTCGGGTACTGCccatttgcttttttatttagtcGTTTCTCTAGTTTCTGCTTTGTAACATCatcaaaaagggaaaaactggTAGCAAAACATATTTCTCCAGATATGTTTACagtattttcacacacacatacacacacacacaatatatatagtaaacCACTGCACCATTGAGTAAGAGGCTGACATTCCCATAAATATTCTAAACAGCCTACTAGGATTTACACCACTTCAGCATGGTCAGTATGATGTGCATTAGATTGAATCCTGAATCCAGTTGCTGAATCTTCTAAATGCTTTGGTATTCCAATATTATGTCCATGTCCTTCCTTGTAAACCCTGCTTTCTTTAACCCTCCTCTGTTAATGGTTAGTTTGTATTGCCAAACTGCATTCTCACAATGTTCTAGAACTCCATATGTTTCTCAATATTCAAATAGATGCAGCTTGGTCTTAGTCCCATACATGAACACATGGATAGTGCACCTCTAATTCACAGCATCACCAGCTGCTATGTAGAGCCTATATATAGCCTGAGCTTCAGCCATTCTTTCCTACAAAATACCTTGCTTTTGTGGTGAATGCACAGTACCTCAAACACTATTCTTGCCAGGATGTAGCCTGACCTTGGTCGTATATGTTATATTACATGACTCCTGCAGGGCTTCAGTAGCAGTAAAAGCCTTTGACTGAAATATATACTTTAGTAATAATGGGGGTTTAAAACCAGGTAGGGACAACACTAGGCAAGGCAGGGCAGTAACAAGAAAGACACTTCCAGAAGGTTGAATTTGCAgttgacaaaacaaacagacttgCTTCTGGGTATCTTTGACATTATAAAGTCTCATCAGAGTGGTTTCCTCTTTTGTATAGTCAACTTGAGACTATTTATCTTTAAACAACTGgaagccattattattattatattacagaaatgtggtatttttcacattttgtgtggGCTAGATATCTGGGTAAAATACACACTGTAGCCTTACAGGGTGTTAAGAGAGCATTCTATAGGaggaaaatgtgaataaatgttaACTCGCTATTATCATATAGTTAATACCTTGTTTcgtatttaaaatagattttcgTTAACATAGTAGTTAATTATTCTTTGTACATTATCTGTAAGCtggtcttgttttatttattatgtattgtgtCTTTGGTAAAGGTATTGCACTATGGTTTTATGACAGCTATAACTCTGTTCACATTTATCAGCGagataaatgtatacattttattttgtgccgTCATAATAAAATGACCTTAAAGTTTTTCACAACTCCagcttatgtatttttgttatgcACATGGgggatttttttaatgctgagctttatttttgatgaaatatgatgaaattacatttatgtaacaaataaaggattgtactgtattaacacTGTTCTCCCTGAGTATTTTTGTACGTAAGGATCCAC

Function

symbol description
gucd1 Orthologous to human GUCD1 (guanylyl cyclase domain containing 1).

NR:

description
PREDICTED: protein GUCD1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018850 True 3914 mRNA 0.40 6 22862980 22870773

Neighbor

gene id symbol gene type direction distance location
AMCG00018853 NA coding upstream 27896 22820669 ~ 22835084 (+)
AMCG00018852 NA coding upstream 47117 22807605 ~ 22815863 (+)
AMCG00018854 NA coding upstream 55948 22800053 ~ 22807032 (+)
AMCG00018851 NA coding upstream 64615 22792277 ~ 22798365 (+)
AMCG00018846 NA coding upstream 96954 22763078 ~ 22766026 (+)
AMCG00018876 NA coding downstream 1501867 24372640 ~ 24377928 (+)
AMCG00018886 selenom,selm,LOC103043669 coding downstream 1838901 24709674 ~ 24713528 (+)
AMCG00018899 NA coding downstream 2213403 25084176 ~ 25090285 (+)
AMCG00018897 LOC106585468,LOC104958862 coding downstream 2220358 25091131 ~ 25117419 (+)
AMCG00018908 NA coding downstream 2265814 25136587 ~ 25144798 (+)
G119100 LOC106566253 non-coding upstream 1172 22765551 ~ 22861808 (+)
G119071 NA non-coding upstream 195839 22666892 ~ 22667141 (+)
G119016 NA non-coding upstream 283644 22579051 ~ 22579336 (+)
G119015 LOC106927871,LOC103148411 non-coding upstream 285267 22577501 ~ 22577713 (+)
G119014 NA non-coding upstream 286020 22576722 ~ 22576960 (+)
G119177 NA non-coding downstream 108498 22979271 ~ 22982799 (+)
G119178 NA non-coding downstream 124203 22994976 ~ 22995190 (+)
G119231 NA non-coding downstream 223793 23094566 ~ 23108600 (+)
G119234 NA non-coding downstream 238828 23109601 ~ 23111520 (+)
G119272 pitpnb,LOC107396064,LOC107653151,LOC107704163,LOC107706770 non-coding downstream 1024254 23895027 ~ 23928632 (+)
AMCG00018820 NA other upstream 965280 21848370 ~ 21897700 (+)
G118815 NA other upstream 1673734 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 2090394 20723610 ~ 20772586 (+)
AMCG00018800 ddx55,gtf2h3,eif2b1 other upstream 2167786 20679280 ~ 20695194 (+)
AMCG00018792 LOC106928543 other upstream 2259665 20601956 ~ 20603315 (+)
G119507 NA other downstream 2363309 25234082 ~ 25267781 (+)
AMCG00018913 NA other downstream 2595318 25466091 ~ 25485446 (+)
AMCG00018922 med13l other downstream 2807904 25678677 ~ 25718426 (+)
G119762 NA other downstream 3589847 26460620 ~ 26461227 (+)

Expression


Co-expression Network