AMCG00018866


Basic Information

Item Value
gene id AMCG00018866
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 23012422 ~ 23032810 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018866
GTCGTCTGGCAAAAGTTGTCAGCCGTGCCCAGAATGGAGACGAGATCAGGGATCTAGTGTCTGGCAGCTcttttgtgttaatttactgAAAAGCACATCTCCAAAGAACTAGGGAGGGAATGCTGTGATGGGTGCTGCCAGACTTTTCCTGTCCCGCAGGCTCCTCCTGTCCCGAGATCCCAGGGGGCTAAGCTTGGTGCCATGGCGGCTAACACAAGCTGCCCTCCTGAAGCCCCCAGTTGCCAGGCACTACAGAGCTGTTATTTTTGACATGGGAGGAGTGATTCTGCCATCGCCATACAAAAAAGCTGCAGAATGGGAACTGCGCCATGGTGTACCGGCTGGCACTATCATCAAGGCCATCAGGGCTAGGGGTGAGAACAGTGCCTGGATGAAGTACATGAGAGGAGAGCTGAGTGCTGCACAGTTCGTGGATGCGTTTGGAAAAGAATGCACAGCGATAGCTGGCCACAGTGTCCCTGCCAGCTCCTTCCTGTCTGACCTCACCATGGGACCCATGGCCCAGCAGCTGCCCGCCATGACCGAGGCCATCCGTCGTATCCGGGCTGAGGGCCTGAAGACGGCCCTGCTCAGCAACAACTTCTTTCTGCAGGGCGGAGACACCTATCTGCCTGTGGAGCGTGCCCAGTTCGACGTGATTGTGGAGTCCTGTATTGAAGGGATATGCAAGCCCGATCCCCGTATTTACCAGCTGTGTGTCGACCGCTTGGGAGTCCTACCACAGGACGCCGTGTTTCTCGACGACGTCGGACAGAATGTGAAGGCAGCCGCACAGCTGGGAATCCGCTCGATCAAGGTTGAAGACCCATTGACAGCAATAGAGGAGCTGCAAGGCTTGCTGGGATTCTCTCTGTCAGGGTTCGTTCCTGGCACCATCAGCCCTACTATGGAACTCCCCACTGACCGGCTTAGACAGTACTTACAGAACACGCTGTCTCTCGGGGCCACAGTAGCATTGGATTTGCGACAGTTCAGCCATGGCCAGTCCAACCCCACCTACCTGGTGTCTATCGGGGGGCGCCAACTTGTTCTGAGGAAGAAACCCCCAGGGCCATTGCTGCCCTCTGCCCATGCTGTGGAGAGGGAGTTCAGGGTCCTGAAAGCCCTGGGGAAGGCTGGCATTCCTGTGCCCAAAGTGATCGCCCTGTGCGAGGACTCCAGtgtAATTGGCACCCCCTTCTACCTGATGGACTACTGTCCTGGGAGGATATTTAAGGACCCCTTGCTGCCAGGGATGACCAGCGAGGAGAGGAAGGAGGTGTACAAGGCCATGAGCCGCGTCCTCTGCCAGATTCACAGCGTGGATGTCAAGGCGGCTGGCCTGGAGGACTATGGCAAATCTGGTAACTACGTTGCTCGGCAGGTGCGGACCTGGACCAAGCAGTACCGGGCCAGTGAGACGCACCGTATCTCGGCCATGGAGAGGCTGATCAAGTGGCTCCCGCAGCACCTTCCAACACATACGAAGACGACTGTGGTGCATGGAGACTTCAGGCTGGATAATCTGATTTTCCACCCGGAGAAGCCTGAGGTTGTGGCTGTGCTGGACTGGGAGCTGTCCACTCTGGGAGACCCCATCTCTGACCTGGCATACAGCTGCCTGGCACATTACCTACCTCCCAGTTTCCCAGTTCTCAAAGGGATGAGCCAGTGTGATCTGCCCGGGCTGGGCATCCCCAGTGCAGAGAAGGTCTTCACCCAGTACAGCCGGTGCATGGGTTTGGAGTGCTTGGACAACTGGAACATGTACATGGCCTTCTCCTTCTTCAGAGTGGCTGCCATCCTGCAGGGGGTCTACAAGCGCTCCTTAGAAGGGCAGGCAAGCTCTACCAGCGCTGCCAGTGTGGGGAAGATGGCGGAAGAGATGGCAGAGCTGGCTTGGGGTTTCGCCACCAAGGAGGGCTTCCGGGTCTTCAAATCCATGCCTACAGGAGCTCCGGGCACAAGCCCCCGTAGGAGCTTCAGCGGCTGGAGCCCAGCCCTAACCACAGCCCCCCGCCTGCCTGACAGCTTCTCCATTCGCCAGGCCTCGGGGGGTGACACCTCTCCTCCCCTAGATCCAGGTCATCTGATCATCTCCCCCACTAGCTTGCCACCCCACGTCCAGGCGCTGCACCGTCGCCTGCAGGAGTTCATGAGCGCCCGCATTCTCCCTGCAGAGCAGCAGCTGCGGGACCACCAAGCATCTGCGGACCGGTGGACCCCTCATTCAATGGTAGAGGAGCTTAAGGCTGAGGCCAGAGCAGCGGGACTGTGGAACCTTTTCATCCCAAGGGAGGTGGACACCAAGGCCCAGTTGGGGGTGGGACTGACCAACCTCGAGTACGCCCACCTGTGTGAGCTGATGGGCCACTCAGTGTTTGCCCCAGAGgtgtTTAACTGCTCTGCCCCAGACACTGGGAACATGGAGGTGCTCATTCGCTATGGGTCAGAGCAGCAGAAGGAGGAATGGCTTGTCCCACTGCTGAACGGCACGATCCGCTCCTGCTTCGCCATGACGGAGCCAAAGGTTGCTTCATCAGATGCAACAAACATTGAAGCCTCAATCACACAGGACAAAGATTCCTACATTATAAATGGGCATAAATGGTGGATATCAGGAGCCCTCGACCCTCGCTGTAAAATCTGTGTGTTCATGGGAAAGACCGACCCCAGCGCCTCGAGGCACAGGCAGCAGTCTATGATCCTGGTTCCCATGGATTCGCTGGGTGTGACAGTTGTGAGACCTCTCTCTGTGTATGGAACTGAAGACGCTCCAGCTGGCCATGCGGAGCTGCTGTTTGAGGGGGTCCGCGTGCCCCGCAGTAACCTGCTGCTGGGGGAGGGCCGGGGTTTTGAGATCGCCCAGGGCCGGCTGGGGCCAGGCAGGATCCACCACTGCATGAGGCTGGTGGGACATGCGGAGAGGGCCCTGGAGCTCATGAAGGACAGGGTGAAGGGAAGAGTGGCCTTCGGGAAGCCCCTGGCCGAGCAGGGGACTATCCTGGCTGACATTGCAAAGTCGCGCATGGAGATCGAGCAGGCGAGGCTGCTAGTGCTGAAGGCAGCCCACCTCATGGACACGGTGGGGAACAAGGTGGCAGCCCCGGAGATTGCCATGATTAAAGCAGTGGCCCCCAGCATGACTCTGCGGGTTGTTGACCGGGCCATCCAGGCTTTTGGAGCGGCAGGGCTGAGTAACGACTACCCTCTGGCCACCTTCTTCAGCTGGGCACGAGCCCTACGCCTGGCAGACGGGCCAGATGAGGTTCACCAGGCGGCGGTGGCCAAAATGGAGCTGAGGCGGTGACTCTGCACTTCTCAAGGGAGCCTGGGAAAGCAAACCCGAACTCAACCTGGATTTCCTCGTTTCCTTCATTCAGTTTAAATGCCGCTGAAGGCCTGTTTttataattgtctgtatgtgtttaCCTTCTCAGGCCTGGTAAAAAGGGTGAATGTGAGTTGTGTCCAAGGACCTTAAAGTTattaaatttgaatgtattaatttatgcccccctttttttaaatttataaaattacccttttacaaatgaaaatatttagtgcaataaaacagaataaacatatataattgtgttttgacTGAGAGTATTTAAT

Function

GO: NA

KEGG:

id description
K11729 ACAD10; acyl-CoA dehydrogenase family member 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018866 True 3621 mRNA 0.56 21 23012422 23032810

Neighbor

gene id symbol gene type direction distance location
AMCG00018868 aldh2,LOC106578507,LOC107662045 coding downstream 1169 22998635 ~ 23011253 (-)
AMCG00018867 ptpn11 coding downstream 19185 22987225 ~ 22993237 (-)
AMCG00018862 NA coding downstream 84987 22899552 ~ 22927435 (-)
AMCG00018863 NA coding downstream 125378 22876661 ~ 22887044 (-)
AMCG00018858 bup1,upb1 coding downstream 136662 22871159 ~ 22875760 (-)
AMCG00018864 NA coding upstream 1559 23034369 ~ 23047483 (-)
AMCG00018865 NA coding upstream 23510 23056320 ~ 23083052 (-)
AMCG00018869 NA coding upstream 53951 23086761 ~ 23087315 (-)
AMCG00018871 NA coding upstream 790656 23823466 ~ 23827059 (-)
AMCG00018870 pitpnb,LOC106585622,LOC106580376 coding upstream 827702 23860512 ~ 23873031 (-)
G119181 NA non-coding downstream 27650 22984184 ~ 22984772 (-)
G119180 NA non-coding downstream 28856 22982866 ~ 22983566 (-)
G119129 NA non-coding downstream 154743 22834759 ~ 22857679 (-)
G119128 NA non-coding downstream 246396 22762360 ~ 22766026 (-)
G119072 NA non-coding downstream 345212 22666929 ~ 22667210 (-)
G119235 NA non-coding upstream 76791 23109601 ~ 23111520 (-)
G119382 NA non-coding upstream 1486603 24519413 ~ 24608462 (-)
G119384 NA non-coding upstream 1533336 24566146 ~ 24568299 (-)
G119426 NA non-coding upstream 1803977 24836787 ~ 24842121 (-)
G119466 NA non-coding upstream 2012141 25044951 ~ 25045344 (-)
G119144 NA other downstream 206084 22804345 ~ 22806338 (-)
G118936 NA other downstream 898727 22080464 ~ 22113695 (-)
G118727 NA other downstream 2314595 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 2322500 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 2333985 20644885 ~ 20678437 (-)
AMCG00018898 NA other upstream 2042588 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 2101961 25134771 ~ 25171644 (-)
G119545 NA other upstream 2153397 25186207 ~ 25187408 (-)
AMCG00018929 NA other upstream 3418914 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 3744825 26777635 ~ 26797720 (-)

Expression


Co-expression Network