AMCG00018891


Basic Information

Item Value
gene id AMCG00018891
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 24821217 ~ 24826738 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018891
TGAGCAACactgacagagagggagaagctACACTGAACATCCTGATCTGTCAGTGAGCAAGCGAACCgatttgttctatttttattttatttttattttttccccctgattTTTCAGACTTCTTGAAGATTTGTCACATAGTTTATTGTTGGTGTCCAGACTAGTATGAACTCAAAGTAAAAGTGTAGTATTGAAAGTAGTAATTTAATGCAGACAACATCACTCAATCACACTTTCCCATGCTGCTGTTAATGACCCACCTCAAAGGCCATTGTGTAGGAATGGTGTTACGTTTTTACTATTGTTCCCAAGCTCCAGTGTGGGTTTATTACGGCTCTTTCACAATAACGAAGCTTTGTCACTAAGTATGATGGTAGTCAACAACACTGCTTTAAAGTCCCCTATTGTGAGCACTGTTTGTAGAGagatcttttattttctctctctctctctctctctctctctctttctcttttcttttaatagcaTAGAGAAGGAAAGTCAGTCTGCCACTTCTGCACACGGATACAAAATTGAATTTAGTTTGGTTGATTGGAGTTATTTCTGCTCCTGCTTCAGGAGGGGAGAATGTTCATCACGGTGTGCTTTGGGGACGATCAGAAGGAGCTGTTTAACCCAAATTGCAGAATCATTAACTTGATCCACTCCCTGAGAGAGAGGTGCAACCTTGAATGTGAAgCAGAGTGTGTGGACCTCGTTGATGAGTCAGGGGAGCTGGTGAACTTCAGTGAGAGGCAGAGCTCCCAAGAATATGCCAGCAGCTTTCTGAAGGAGAGACACAGCTACATCCTCATTAAAGTCACCAAAGGAGAGGGCAGTGAGGGGAACAAATATGAGTCACTGTTACTGAACCTTGGGAAGAGTTACCCGGAAGTAGCAGACCTTCTTAAGAAGCTGTCGAACCCTCGCAGAGACCAAGATAAGAAGAGCAGCTCCATGAGAGGACGTCTTCAGAAGGAACTACCTGCGGTCCAGCAGACAAAGAGCAAAGCAGCTGTCAGCCCCAGGAAGAACGCCAGCAGCACTAGAGTTAACCAGAGCTTCACTCAGAGTTGAGCTGGAGAGAAGGAATCCATCTGGATCTCAGCTACAGAAGGAAGACATTCctaatgcaaaaacatttttatgtctTCAGTATGTTTACATACTGGTAATTCAGTCATGAAACTAGGACTGGTGTCATggttaatttaaagtgtttatgACCGATTACAGTTTAGAATAGTTTGGGTTTACAGTTCAatgcaaattaaaccaaaatcaacacaacaaaaaacaggtcCAAAGTAGGAACTGTTAAAATGATTTCTCCATGAACCAAAACACACATATTGCCATTCCACCTCAAAAGAAGGCATGAAACTACCTCCACTTTCATGATTTTCTACCCAAATGTAAATACAGCcactaaaacaaaaacgtatGGAGATGATCTTCAAAAACCCCCCTGAGCCCTGTTACCTCTCATCTGGACCCAGCAAGTAGTGCTTTagctttgaataaaaaaaatgttcaaagggatttcttttatctttttttttctagacTTTCCCTGCAGACTCACTGAGCATTTACAGGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018891 True 1603 mRNA 0.41 5 24821217 24826738

Neighbor

gene id symbol gene type direction distance location
AMCG00018893 NA coding downstream 13310 24799019 ~ 24807907 (-)
AMCG00018890 NA coding downstream 44517 24756869 ~ 24776700 (-)
AMCG00018887 NA coding downstream 85066 24715823 ~ 24736151 (-)
AMCG00018889 LOC107662051 coding downstream 130403 24660466 ~ 24690814 (-)
AMCG00018888 si:ch211-193c2.2 coding downstream 162196 24652459 ~ 24659021 (-)
AMCG00018892 adora2a,LOC106566259,LOC106563117,LOC106514582 coding upstream 29476 24856214 ~ 24876807 (-)
AMCG00018894 specc1l coding upstream 62893 24889631 ~ 24934952 (-)
AMCG00018895 bcr,LOC106579959 coding upstream 134340 24961078 ~ 25007942 (-)
AMCG00018896 NA coding upstream 244804 25071542 ~ 25073116 (-)
AMCG00018904 anapc7 coding upstream 366426 25193164 ~ 25203675 (-)
G119382 NA non-coding downstream 212755 24519413 ~ 24608462 (-)
G119384 NA non-coding downstream 252918 24566146 ~ 24568299 (-)
G119235 NA non-coding downstream 1709697 23109601 ~ 23111520 (-)
G119181 NA non-coding downstream 1836445 22984184 ~ 22984772 (-)
G119180 NA non-coding downstream 1837651 22982866 ~ 22983566 (-)
G119426 NA non-coding upstream 10049 24836787 ~ 24842121 (-)
G119466 NA non-coding upstream 218213 25044951 ~ 25045344 (-)
G119557 NA non-coding upstream 435624 25262362 ~ 25333175 (-)
G119600 NA non-coding upstream 652272 25479010 ~ 25479524 (-)
G119615 NA non-coding upstream 745316 25572054 ~ 25578122 (-)
G119144 NA other downstream 2014879 22804345 ~ 22806338 (-)
G118936 NA other downstream 2707522 22080464 ~ 22113695 (-)
G118727 NA other downstream 4123390 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 4131295 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 4142780 20644885 ~ 20678437 (-)
AMCG00018898 NA other upstream 248660 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 308033 25134771 ~ 25171644 (-)
G119545 NA other upstream 359469 25186207 ~ 25187408 (-)
AMCG00018929 NA other upstream 1624986 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1950897 26777635 ~ 26797720 (-)

Expression


Co-expression Network