AMCG00018893


Basic Information

Item Value
gene id AMCG00018893
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 24799019 ~ 24807907 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018893
ATGGTCTTTAACCTGCTTGCAGAGCTTCCCCACGTCAGGATGGAGGAGGAAAACACCCAGCTCTGTGCCAACTGCAAACGTGAGATCCCTGCAGTGAATTTCACCATGCATGAGATGCACTGCAGGCGCAACATCAAGCTGTGCCAGCACTGCCAGGAGCCCGTGCCCCACTCCGACATGGAGCAGCACATTCAGGAGGAGCACATGCAGGTGCAGTGCAAGTGTGGTGTGAATatggagaaaaaacagatgGAGAAACACCAGcagctgcagtgcagCCTGCGTCTGATGAAGTGCCAGTTCTGCGAACTGGAGGTGCCCTTCAGCCAGCTGGTCGAGCACGAGGACTACTGTGGGGCACGAACTGAGCTCTGCCCCAAGTGCCAGCGCAACGTCATGGTGAAGGAGCTGGACATGCACCCCCTGCTGTGTGGTACCCAGCAGCCTGAGGAGCGCAACAACGCGCGGGCCAGGCCTGGCCCGGGGGAGCGCCCGCCTGAGGTCTGGTTTGAGACTCACTCCATCAGGAACCTGTTGAGGACCCAGGAGCTGCAGAACAGCAATCTGCCACCTGGCCCCCGCGTCCCCAGGCCCCTCGAAGGCCGGGTCCATAACAGCACCAGGGCGGTGGGGGCGTCCCTCAGGAGAAACACTGCGCCCAGGAACAGGGACCAGAACATCATGGATGAAGAGGATATTGTAGAGCGTAACAGAGGCAGGGCAGGTGTGGACGTCCCGGGAGGTGAGGCCTCCAGTCTGGACTACCTGCTGGCCCTCAGCCTGCAAAACAACCACCGTCGCGAGCCGTGGACGGAGGGCTGGGGGGACCCTGTGAGTGGGATGACTGGAGCTGCTCACCTAATTTCTGGTGCCCTTACTGGCCTGAGTGGTCTGATCCAGCCCCTGGTCACGGAGCTCACACACACCCCCAACAACAACATCAGCGCCGGGCAATCAGcGGTGTCTGACACCATGCTGCCCTGCGAGTTCTGTGAGGAGCTGTTCCCTGCCGAGGACCTCATTCTGCACCAGACTGGCTGCAGCCCTGCTAGTGCCTTTGCTTCCTTCAGTAAGAGAGCCCCCTCCCCTCTTCAAGATGACTGGCCCTTTCGGGGTGGGCAGGGGCCTCTCTACCGCTCCTacagcccccccagcccccccagcCCGCCTCGCCACGCCTCCTCCCTGTCCCACAGCCCTCCTCTACAGCCACAAGAGGGTGCCGTTCTCATCCCCTGCGAGTTCTGCGGAGTCACCCTCGAGGAGGACGTCGTCTTTCATCACCAGGACAAATGTGGCTTCCGTCCCGGAACTGCTTACCCCGTGGAGAAGCCCTCTGCCCGGACAGCACTTCCTCCCAAAGTGGACAACACGCAACAGAGCCCTCCAGACCTGCTGAGGCCACGCCTGCGACACCAGGCTGACCTGGTCCCTGAGGCCCTGGAGCGGGTGACAGTGAGGCCCACGGCCCTGGTGGCCCCAGCCAGAGAGAAGCTGGGCAAGGCGACGGTGGGCTCCAGAGAGCGCTGGAAACCAGAGCCCCAGGACACCTTTTCTAGCAGGGAGGCCCACTCCAGCACCCAGATCAGGAGGCCTCAGAGATCGATGGAGCCTGGTGTCCGGGGTGTACACCCACCCTGCCCTGAGGACCATAAACGCAGCTTCCCACAGACCGGCCCCACACCGTCGCCAGGAGGAAGAGTAGATGGACGGAGCAACTCGAGGAACTCTGGGACATCAAAGcCTCGTATCCCCAAGGTGCGCAACGTGGAAAAGGAGGAAGAGTGACGGCTGTGCCTCGGGGGACTGCAGCACTGCTGGATCTCGGGAGGCTTCTGGTCCACTATGCAACACATTCGAGTCCCATGTGTATCGTGTGTAAATGATCACTGTCTTTTCCTATACTTCTGGGCTCAGTAAACGTGAGCATCGGGATTTTAATACAACACGTATAGTTATAACCCGAGTTTTACAACCATTTTGTATAGCCGGTTTCATGGCTGGGGACATTTTAAATGGCGGAAACTGGAGCGGTAGtacatatcttaaaaaaaaaaaaaaaaaaaaaaaagtgagtaAA

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018893 True 2080 mRNA 0.59 11 24799019 24807907

Neighbor

gene id symbol gene type direction distance location
AMCG00018890 NA coding downstream 22319 24756869 ~ 24776700 (-)
AMCG00018887 NA coding downstream 62868 24715823 ~ 24736151 (-)
AMCG00018889 LOC107662051 coding downstream 108205 24660466 ~ 24690814 (-)
AMCG00018888 si:ch211-193c2.2 coding downstream 139998 24652459 ~ 24659021 (-)
AMCG00018885 NA coding downstream 174411 24623703 ~ 24624608 (-)
AMCG00018891 NA coding upstream 13310 24821217 ~ 24826738 (-)
AMCG00018892 adora2a,LOC106566259,LOC106563117,LOC106514582 coding upstream 48307 24856214 ~ 24876807 (-)
AMCG00018894 specc1l coding upstream 81724 24889631 ~ 24934952 (-)
AMCG00018895 bcr,LOC106579959 coding upstream 153171 24961078 ~ 25007942 (-)
AMCG00018896 NA coding upstream 263635 25071542 ~ 25073116 (-)
G119382 NA non-coding downstream 190557 24519413 ~ 24608462 (-)
G119384 NA non-coding downstream 230720 24566146 ~ 24568299 (-)
G119235 NA non-coding downstream 1687499 23109601 ~ 23111520 (-)
G119181 NA non-coding downstream 1814247 22984184 ~ 22984772 (-)
G119180 NA non-coding downstream 1815453 22982866 ~ 22983566 (-)
G119426 NA non-coding upstream 28880 24836787 ~ 24842121 (-)
G119466 NA non-coding upstream 237044 25044951 ~ 25045344 (-)
G119557 NA non-coding upstream 454455 25262362 ~ 25333175 (-)
G119600 NA non-coding upstream 671103 25479010 ~ 25479524 (-)
G119615 NA non-coding upstream 764147 25572054 ~ 25578122 (-)
G119144 NA other downstream 1992681 22804345 ~ 22806338 (-)
G118936 NA other downstream 2685324 22080464 ~ 22113695 (-)
G118727 NA other downstream 4101192 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 4109097 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 4120582 20644885 ~ 20678437 (-)
AMCG00018898 NA other upstream 267491 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 326864 25134771 ~ 25171644 (-)
G119545 NA other upstream 378300 25186207 ~ 25187408 (-)
AMCG00018929 NA other upstream 1643817 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1969728 26777635 ~ 26797720 (-)

Expression


Co-expression Network