AMCG00018896


Basic Information

Item Value
gene id AMCG00018896
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25071542 ~ 25073116 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018896
ATGGTTGAACCTGTGGGTTTTGTGGAAGCTTGGAAAGCCCAGTTCCCTGAATCGGACCCTCCCAAGATGGAGTTGAGATCAGTGGGGGACATTGAGCAGGAGCTGGAGAAATGCAAGGCTTCCATCCGGAGGCTGGAGATGGAGGTCAATAAAGAGCGGTTTCGCATGATTTACCTGCAGACGCTCTTGGCCAAGGAGAAGAAGAGCTACGACCGCCAACGCTGGGGCTTCAGGAGGGTGTCCCAGTTGAATGAGGGGGGGGTGGTGGCGGATACGCCCGCCGCCACAGAgcccctgcagcagcagcatgaGCAAGGGGAGGGGGACAGGAATAAGTACCACCCAGCCGGGGAGGAGAAATTGAGACCCAGGCCTCCCCCGGTTCGTAAATCGTCCTCTCAGAGTGAGGGCTCGGAGCTGCCAGTGGCTCTGGATGTGCACTACCCGGGCGagcagggggagggggacagaTGTAAATTTTATGGAGATGACAAATTCAAGAGGCACCCTGAGGAGGGTGAAGTGGATGGGCTGTCGCCTTCCAAGCAGAGGGGGGTGGTCTCTTCGCGGCGGGTGGCGGGGGCAGCGTTAGTTGGGGAGAAGGATGCCCCCTCagactcctcctcctcctcccccaagGAGAAGGTGGGCATGAGTGTAGCAGCGCTGCGCTCCAACTTTGAGCGGATTAAGAGGGCTAACTCACACTCGGCTGGGGAGGGCAAAGGAGGGACAGCGGGGGAGAAACCCTTCTACGTCAACATGGAGTACCACCACGAGAAGGGCTTGGTGAAGGTCAATGACCGTGAGGTGTCCGACAAGATCAGCAACCTGGGCAGCCAGGCCATGCAGATGGAGCGCAAGAGGTCACTGCACTCACTGCCTGGGAACCTGGCCTCGGGACTGGGCGAGTACCGGAAGCCTGTCTACAGGGGGCGCTCCACCGAGAGTGGCTACGATGCGGAGTATGAAGACGCCGAGCTCAACCCCCGCTTCCTCAAGGACAACCTCATCCGGGCCAACGGGGGAAAGCAGGACAGGCCGCAGCACTGGCAGCCCTCGGACTTCCAGCCCTACACCAGCGTCTACGTCGGAGGGATGATGGGTGAAGGCGAGGTCAAGGGGGTGCACATGAGGGAAGACGGGGGAGAGCAGGACAAACACCTCACCTGGCCACGCCGCTCCTACTCGCCGGGGAGCTTCGAGGACGTCGGGGGCGGCTACACCCCTGACTGCAGCTCCAATGAGAACCTGACCTCCAGCGAGGAAGACTTCTCCTCCGGCCAGTCCAGCCACGTCTCCCCCAGTCCCACCACCTATCGCCTGTTCCGGGAGAAGAGCCGCTCGCCCTCCCAGAACTCACAGCAGTCCTTTGACAGcagcagcccccccacccctcagtCCCAGAAGCGccacaaacagcagcaggtgGTGGTGTCGGAGGCGACCATCGTTGGCGTGCGCAAAACGGGCCAGATTTGGCCCAACGATGGCGATTCAACACCTTCCAGCAGGGCTTCGCATGACAACAGTTTCCACGGAGACATGGGTGAGTTGAGACCTTCTCTAAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018896 True 1575 mRNA 0.61 1 25071542 25073116

Neighbor

gene id symbol gene type direction distance location
AMCG00018895 bcr,LOC106579959 coding downstream 63600 24961078 ~ 25007942 (-)
AMCG00018894 specc1l coding downstream 136590 24889631 ~ 24934952 (-)
AMCG00018892 adora2a,LOC106566259,LOC106563117,LOC106514582 coding downstream 194735 24856214 ~ 24876807 (-)
AMCG00018891 NA coding downstream 244804 24821217 ~ 24826738 (-)
AMCG00018893 NA coding downstream 263635 24799019 ~ 24807907 (-)
AMCG00018904 anapc7 coding upstream 120048 25193164 ~ 25203675 (-)
AMCG00018903 arpc3,LOC107737855,LOC107707141 coding upstream 140523 25213639 ~ 25217823 (-)
AMCG00018906 gpn3,LOC106566318,LOC106563155 coding upstream 146988 25220104 ~ 25225859 (-)
AMCG00018905 vps29 coding upstream 165781 25238897 ~ 25244280 (-)
AMCG00018907 pptc7,LOC107552188,LOC102794815,LOC107553043 coding upstream 193632 25266748 ~ 25285927 (-)
G119466 NA non-coding downstream 26198 25044951 ~ 25045344 (-)
G119426 NA non-coding downstream 229421 24836787 ~ 24842121 (-)
G119382 NA non-coding downstream 463080 24519413 ~ 24608462 (-)
G119384 NA non-coding downstream 503243 24566146 ~ 24568299 (-)
G119235 NA non-coding downstream 1960022 23109601 ~ 23111520 (-)
G119557 NA non-coding upstream 189246 25262362 ~ 25333175 (-)
G119600 NA non-coding upstream 405894 25479010 ~ 25479524 (-)
G119615 NA non-coding upstream 498938 25572054 ~ 25578122 (-)
G119632 NA non-coding upstream 517456 25590572 ~ 25656954 (-)
G119637 NA non-coding upstream 531915 25605031 ~ 25606144 (-)
G119144 NA other downstream 2265204 22804345 ~ 22806338 (-)
G118936 NA other downstream 2957847 22080464 ~ 22113695 (-)
G118727 NA other downstream 4373715 20696834 ~ 20697827 (-)
AMCG00018805 eif2b1,LOC106580370,LOC106585290 other downstream 4381620 20683666 ~ 20689922 (-)
AMCG00018797 NA other downstream 4393105 20644885 ~ 20678437 (-)
AMCG00018898 NA other upstream 2282 25075398 ~ 25084586 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other upstream 61655 25134771 ~ 25171644 (-)
G119545 NA other upstream 113091 25186207 ~ 25187408 (-)
AMCG00018929 NA other upstream 1378608 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1704519 26777635 ~ 26797720 (-)

Expression


Co-expression Network