AMCG00018910 (LOC108239856,LOC107385499,LOC103139559,LOC103366907)


Basic Information

Item Value
gene id AMCG00018910
gene name LOC108239856,LOC107385499,LOC103139559,LOC103366907
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25331301 ~ 25338053 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018910
TCCTCTTTGTCCTGTTACACCTCCAGCAATGGCACCAAAAAAGGCAAAGAAGAGAGCAGAGGGAGCCAACTCCAATGTCTTCTCCATGTTTGAGCAGGCCCAGATACAGGAGTTTAAGGAGGCTTTCACCATAATGGATCAGAATAGAGACGGCTTCATTGACAAGAACGACCTGAGGGACACCTTCGCAGCTCTTGGCCGACTGAATGTGAAACAGGAGGAGATTGATGAGATGCTGAAGGAGGCCCCTGGACCAATCAACTTCACGGTCTTTCTAACTATGTTCGGTGAAAAGCTAAAAGGTGCTGATCCTGAGGAGACCATTCTGAATGCATTCAAAGTATTTGACCCAGAGGCCAAAGGAGTTTTGAAGAAGGATTATGTTACAGAGATGCTGACAACCCAAGCTGACAGATTCTCCACCGAAGAGATGGAACAGATGTTCACAGCTTTCCCTCCAGATGTGGCTGGTAACCTCGACTACAAGAACCTGGTCTACATCATCACGCACGGAGAGGACAAAGATCAAGAATAGAGCGCTGGCCCCTTGTGTTAACCCCCCTCCTACCTTATCTGTGCCACTTTCCTCTATCCTAACATAGTTGCCCCCCCCGATACCACTCTCACCCAGTATCCACTCCCCTGTACTCCCTCTGCTGCTCCAATGATCAATCTCAGTCTAGCCACCTTGTAAATGACAGAACGCTTTCTTTACTGCCTGCTTGCAGCTACAGATCTTCATTGACGTCTTGACTGTAATACTGTGAGTTACAATCCTCTGCCACTTATTGCATATCACtagatatacatatttatgggGTTTGGATttagtgttattttgtttttgtttgtttgtatattccgttttgtttcattttcccaAGAGAGGACAAACACAAACCGTTTCTGGAAGTTCAAAATTAAACTTGTACAATAAATGATCTCGGCACTTTTCTTGCAGTTTGTTGACttattgctctttttttttcccccaactgTTGCTTCGCTGACAGACAAAAAAGGCAGAAATCCTGACCTGTAC

Function

NR:

description
PREDICTED: myosin regulatory light chain 2, ventricular/cardiac muscle isoform

GO: NA

KEGG:

id description
K10351 MYL2; myosin regulatory light chain 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018910 True 1042 mRNA 0.45 7 25331301 25338053

Neighbor

gene id symbol gene type direction distance location
AMCG00018911 ppp1cc,LOC107567955,LOC105902522,LOC108259981 coding downstream 16089 25303537 ~ 25315212 (-)
AMCG00018912 NA coding downstream 29599 25294104 ~ 25301702 (-)
AMCG00018907 pptc7,LOC107552188,LOC102794815,LOC107553043 coding downstream 45374 25266748 ~ 25285927 (-)
AMCG00018905 vps29 coding downstream 87021 25238897 ~ 25244280 (-)
AMCG00018906 gpn3,LOC106566318,LOC106563155 coding downstream 105442 25220104 ~ 25225859 (-)
AMCG00018916 NA coding upstream 151391 25489444 ~ 25533356 (-)
AMCG00018917 NA coding upstream 209489 25547542 ~ 25553092 (-)
AMCG00018920 NA coding upstream 258483 25596536 ~ 25600663 (-)
AMCG00018925 slc35e4 coding upstream 1006577 26344630 ~ 26356608 (-)
AMCG00018926 NA coding upstream 1029297 26367350 ~ 26410785 (-)
G119466 NA non-coding downstream 285957 25044951 ~ 25045344 (-)
G119426 NA non-coding downstream 489180 24836787 ~ 24842121 (-)
G119382 NA non-coding downstream 722839 24519413 ~ 24608462 (-)
G119384 NA non-coding downstream 763002 24566146 ~ 24568299 (-)
G119235 NA non-coding downstream 2219781 23109601 ~ 23111520 (-)
G119600 NA non-coding upstream 140957 25479010 ~ 25479524 (-)
G119615 NA non-coding upstream 234001 25572054 ~ 25578122 (-)
G119632 NA non-coding upstream 252519 25590572 ~ 25656954 (-)
G119637 NA non-coding upstream 266978 25605031 ~ 25606144 (-)
G119655 NA non-coding upstream 380533 25718586 ~ 25718976 (-)
G119545 NA other downstream 143893 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 159657 25134771 ~ 25171644 (-)
AMCG00018898 NA other downstream 246715 25075398 ~ 25084586 (-)
G119144 NA other downstream 2524963 22804345 ~ 22806338 (-)
G118936 NA other downstream 3217606 22080464 ~ 22113695 (-)
AMCG00018929 NA other upstream 1113671 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1439582 26777635 ~ 26797720 (-)
G119827 NA other upstream 1475427 26813480 ~ 26814073 (-)
G119893 LOC101154678 other upstream 1892820 27230873 ~ 27242574 (-)

Expression


Co-expression Network