AMCG00018917


Basic Information

Item Value
gene id AMCG00018917
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25547542 ~ 25553092 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018917
CTCGACTCTGTTTACAGTTGGAGCGCACAGCTGTGGTCACTATGAAGCCCGGCGATTACACTGTCATTTATTACTAATTGTCATCCCATGTATCGTGCTGCTATGGCCGTGGACAGCTGTTGGTGCTGGATGTCCATCATCTCGGTGCTGTGGGGCCCGTCACTGTGGTCAAGCCTCGGAGTTTCGGGGGAGCGCGTTGCCTTGGTGGAGGTGTTTCTCCGGGACCGGCCGGGATCCACTCTGCTGCAGGGATCTCCGCTGGACGGGGAAAGCGCCGTTGACCGCGACCAGAAGAGCCAGGGCCACAGCCGCGAGTGCGTCGAGGGCAGCCTGCGGCTGgttcaggttcagggAGAAGAGGTAGATCTCCAGATGGACTCAGAAGCAGAGGTGCCCTGGATTGGAGTGGTTCCTGTCAAGCTAGACGAGAGGGAAGCACCCCAAGGCAACCAGGAGTCCTTTGCAGCTGCAGTAGTTAACAAGATGAAAAGAGCGCTGGTTCTGGGAGCCTCAGCCCTTCTCATCCTAGCGCTGAATCAGAACACCATCCGAGAGATGGATCTTTCCCAGGTGCTCTCCAAGCCAGTCATTGTGATCCAGACCTCAGAAAACGTCACAAGGCTGATTGGGGCTCTGCTCAGGGGCCTGCGGGCGACAGCAAAGATCACATACAAGTCCATCCTGCAGGATAATCTGGGGGCCACTCTGACCCTTTGGTCAAGCTGTGGCCGGTCCAGGGGGGGGCTCTACGGGGAGTGGCAAGGGGTCATCTGCACTGGAGAGACCAATTCTCAGGTTCAGAAATACCTCCAGCAGCTGTGGAATACAGTTCTCCTGGTGGCTCTGATTCTGTGCACTGGGGTGATAGTGCAAGCGCGCTGGCAGTACAGACACAACCAGCTCAACGATGACATGGAGTTACACCCAAAACAGGACATTGTGAAACGTCTGGCTGCCTTAAAAACGAGAAAGTACTACCCGCCCAAGACACGCAGCGAGCAGGGACAGGCCGGGGAGACGGACAACTGTGCGGTGTGCCTGGAGCCCTTCAGCAAGAACCAGTGTTTGAGGGTCCTGCCGTGTCTTCACGAGTTCCACAGAGACTGTGTGGACCCCTGGCTGCTCCTTCAGCAGACGTGTCCCCTCTGCAAGCGCAGCATACTGGCAGTGCAGACCCTACCTGTGTCTCTGAACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018917 True 1197 mRNA 0.57 10 25547542 25553092

Neighbor

gene id symbol gene type direction distance location
AMCG00018916 NA coding downstream 14186 25489444 ~ 25533356 (-)
AMCG00018910 LOC108239856,LOC107385499,LOC103139559,LOC103366907 coding downstream 209489 25331301 ~ 25338053 (-)
AMCG00018911 ppp1cc,LOC107567955,LOC105902522,LOC108259981 coding downstream 232330 25303537 ~ 25315212 (-)
AMCG00018912 NA coding downstream 245840 25294104 ~ 25301702 (-)
AMCG00018907 pptc7,LOC107552188,LOC102794815,LOC107553043 coding downstream 261615 25266748 ~ 25285927 (-)
AMCG00018920 NA coding upstream 43444 25596536 ~ 25600663 (-)
AMCG00018925 slc35e4 coding upstream 791538 26344630 ~ 26356608 (-)
AMCG00018926 NA coding upstream 814258 26367350 ~ 26410785 (-)
AMCG00018928 rasl10a,LOC106584972 coding upstream 1070732 26623824 ~ 26625548 (-)
AMCG00018931 ap1b1 coding upstream 1180175 26733267 ~ 26771289 (-)
G119600 NA non-coding downstream 68018 25479010 ~ 25479524 (-)
G119557 NA non-coding downstream 214367 25262362 ~ 25333175 (-)
G119466 NA non-coding downstream 502198 25044951 ~ 25045344 (-)
G119426 NA non-coding downstream 705421 24836787 ~ 24842121 (-)
G119384 NA non-coding downstream 979243 24566146 ~ 24568299 (-)
G119615 NA non-coding upstream 18962 25572054 ~ 25578122 (-)
G119632 NA non-coding upstream 37480 25590572 ~ 25656954 (-)
G119637 NA non-coding upstream 51939 25605031 ~ 25606144 (-)
G119655 NA non-coding upstream 165494 25718586 ~ 25718976 (-)
G119672 tbx3,LOC106563287,LOC106566936,LOC107670392,LOC107566860,LOC107728866 non-coding upstream 467135 26020227 ~ 26068649 (-)
G119545 NA other downstream 360134 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 375898 25134771 ~ 25171644 (-)
AMCG00018898 NA other downstream 462956 25075398 ~ 25084586 (-)
G119144 NA other downstream 2741204 22804345 ~ 22806338 (-)
G118936 NA other downstream 3433847 22080464 ~ 22113695 (-)
AMCG00018929 NA other upstream 898632 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1224543 26777635 ~ 26797720 (-)
G119827 NA other upstream 1260388 26813480 ~ 26814073 (-)
G119893 LOC101154678 other upstream 1677781 27230873 ~ 27242574 (-)

Expression


Co-expression Network