AMCG00018919


Basic Information

Item Value
gene id AMCG00018919
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25601919 ~ 25611337 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018919
CCAATTCATTACTTTAATAGAGAGAACAACCGGTTGATTCCCTCTAATTACTTGACAGACTGCTTCTTTTACACGGTTTGGTTTCAGTGAACCCGGATAATAGACCACATGACCAATTAATTATTGCGTATCAACGAGTATAAAGTCTCACTTAACTAACTTCAATTTCCCTATAAAAGCAGGCGAGACAGATGCATGTTATTAATATCACAATGGCTTTTCTGTGGGGTATTGTAGTGATGGTGGTCCTTTATTGTGTGGTGATCAAAGCACAACCAGATGTGACTGTGGAGTGTAGGGTGGATTCCTTGAGCGTCCTTGTGGTACTGAAACCGGGCTCCCCTTCCCCTGTCCAGTCTGAGGGGCTGCTTCTTGGAAACTGTCTTCCAGTGGTTAGTTCTGATGGCAGGACGGCGGTCTTTGAGTCGGACTTACTCGGCTGCTGTGCCATGCGTATGGCTACAGCTGGCTCACTGGTATACCAGTATACACTGACCTATATGTTGGTTTCAAGTACCAGTCTGAAGTCTGAGCCTATTGTCTGCTCATACACCATGCCTGTTGGCTGGGCTCCGCCACTGTATAATCCTGTTCTGGGTGATGCTGATGGGCTTGGAACTCTGGATTTCAGCATGGAGATCATGATGGATGACTTCAGTGGCCCCAGGATCTCCAGCACATTCTTCCTGGGATCCCTCATCCCCATCAAGGCTGCAGTAGACCAGCAGTTCCACATGCCTCTTGTCCTCTTCTTGGAGGAATGTGTCACTGCCACCTCTGCAAATCTGAGTGCTTCGACCCAGACCTACCCACTCATCTCAAACTATGGTTGCTTCTTGGACAGCCAGAGCTCCAACTCAAAGTTCCTACCCAGAGATCAGACCAATGAAATTAAACTATTGTTACAAGCCTTTACGTTCCCGAACAGTCAAGATGTTTATATCCACTGCCAGCTGGTGGCCTGGGACCCTCAGCAGCCTGGCCCCACTAAGAAAGCCTGTAACTTCAACAAAGGGAACAAAAGCTGGGAGTCTCTGGAAACCCCCACTCAGAATGGGTTGTGCAACTGCTGTGACTCCAACTGCAATCGGCGGAGGAAGCGAGCTGCAGGCATGGATGTGACTATCCAATGTGGGACAGACTCATTGTCTGTAAATGTGACACTCCAGAGGCGCTTTTTACCTCTGGACCCATCTGGTCTGCTCCTGGGAAATTGCCCCCTTTCTACAGTGGTGGATGTAGCTGGAGGGCAGGCTGTGTTCCAGATGGGGCTTTTGGAGTGTTGTTCCATGCGCATGGCTACTGCCAATGTCCTCACCTACAGTAATGTCTTGACCTACAAGCCCACAACATCTTCCTTCTACCCAACCCCATTCTCTATGCCTGTTGTGTGTGTCTACTCCAAACCTCCTGGATGGGCTCCTCCATTGTATAACCCTGCTCTGGGAGATGCTGATGGGTTTGGATATCTGGATTTCAGCATGGAGATCATGAAAGATGACTTCAGTGGCCCAAGAGTCTCCAGCACATTTTTCCTGGGATCCCTCATCCCCATCAAGGCTGCAGTGGCCCAGCAGTCCCACATGCCTCTGGTCCTATTCTTGGAGGAGTGTGTTGCTGCCACCTCTGCAAATCTGAGTGCTTCAAACCAGACCTACCCAATCATCTCAAACTATGGGTGTTTTGTGGATAGCCAGACCAGCAACTCCAGGTTCCAGTCTAGATCCCATTCTTCTGAAATCCGCTTATTTGTACAGGCCTTTAGATTTCTGGAGGGAGTGGATGTTTATATCCATTGTCAGCTGGCTGCCTGGGACCCAGCACTGCTCAATGATCCCACCAAAAAAGCCTGTAATTTCAACCAGAGTACTAGCAAGTGGGTGGATCCTGATGGTGCCCAGAGTGCCTTATGTGGCTGCTGTTCCTCCAGCTGCAATACAAGAGTCAGGCGAGATGCAGCTGAGCAGGGCCTGAGCCATATTACTGTCCTGGGACCTGTGAAGATCCTTGCTGAAGAACCAAGTGGTGCTTTGGAGACTGAGGCCCCTGCTGTGGTCATGCATGAGGGTGGCAAGTTTCCTCAGTGGGTGACCTTGGTGGCCTGTGCCCTGCTGGTGTTGGCTGTGCTGGGTGCCCTGTCTATGGTGTACTACTTCTGTGTGTGGCAGCGTGCTTCTGTGACCAGCAAGATGGGGCAAGAGCTGCTCATCCCTGTGCAGATTGATGACCTGCACAGGGCAGTGGGCATAATCCACTGCAGCTTCCCAAAGGAGTCCTATTGAACCATTTGTCTGTAAAGTTCATTAAACCACTTCCATGCAGTACCTTTGTCTCTTTACTTCTTTCAATTATGGGTCCTGCACCAATATATTTAGctcttgtatttgtttatgctAGCAAGACCTTGTTACTCGGTCTCATGGAATACTCAATTTGAAGGAGTTTGGGTAGATCtagaggtgtgtgtgtccccGTCCCCCCCCCACTCTAAAGTGGGTAGTGTAGCTTTATGGAGTCTTATGATCTTGGCTCTGATTTTTGGGTAGCATAGGCCTTTCCCATTTAACTAAGACCAAAT

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018919 True 2578 mRNA 0.49 17 25601919 25611337

Neighbor

gene id symbol gene type direction distance location
AMCG00018918 mtfp1,LOC102779258 coding upstream 9228 25584316 ~ 25592691 (+)
AMCG00018914 NA coding upstream 19525 25555456 ~ 25582394 (+)
AMCG00018915 NA coding upstream 57039 25534103 ~ 25544880 (+)
AMCG00018909 NA coding upstream 307762 25287408 ~ 25294157 (+)
AMCG00018900 NA coding upstream 340637 25245645 ~ 25261282 (+)
AMCG00018921 med13l coding downstream 17400 25628737 ~ 25642468 (+)
AMCG00018923 tbx3,LOC106563287 coding downstream 454306 26065643 ~ 26077262 (+)
AMCG00018924 tbx5,tbx5a,LOC107670381,LOC101474152 coding downstream 542318 26153655 ~ 26193484 (+)
AMCG00018927 NA coding downstream 820379 26431716 ~ 26438313 (+)
AMCG00018934 NA coding downstream 1261513 26872850 ~ 26875837 (+)
G119574 NA non-coding upstream 113770 25485845 ~ 25488149 (+)
G119529 LOC108239856,LOC103139559,LOC107385499,LOC103366907 non-coding upstream 263730 25331390 ~ 25338189 (+)
G119523 NA non-coding upstream 288424 25303186 ~ 25313495 (+)
G119429 NA non-coding upstream 750869 24850836 ~ 24851050 (+)
G119419 NA non-coding upstream 792100 24807747 ~ 24809819 (+)
G119669 NA non-coding downstream 427942 26039279 ~ 26078413 (+)
G119682 NA non-coding downstream 496132 26107469 ~ 26107849 (+)
G119684 NA non-coding downstream 501535 26112872 ~ 26113131 (+)
G119703 NA non-coding downstream 665048 26276385 ~ 26276585 (+)
G119750 NA non-coding downstream 830856 26442193 ~ 26444060 (+)
AMCG00018913 NA other upstream 116473 25466091 ~ 25485446 (+)
G119507 NA other upstream 334138 25234082 ~ 25267781 (+)
AMCG00018820 NA other upstream 3704219 21848370 ~ 21897700 (+)
G118815 NA other upstream 4412673 21187956 ~ 21189246 (+)
AMCG00018802 dnah10,LOC102798403,LOC105907537,LOC105907538 other upstream 4829333 20723610 ~ 20772586 (+)
AMCG00018922 med13l other downstream 67340 25678677 ~ 25718426 (+)
G119762 NA other downstream 849283 26460620 ~ 26461227 (+)

Expression


Co-expression Network