AMCG00018920


Basic Information

Item Value
gene id AMCG00018920
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 25596536 ~ 25600663 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018920
GGCTGGAGCGACACAGTGCTGTGTTGGAGATGTTTTACTTGTGGAGCGTAGTTTGTGTGGGCCTTGTGTGTGCTGGTTTGGCCGCAGCACAAATGGATGTGACGATCCAATGTAGTGCGGACTCTGTGACTGTGCGTGTTGGCTTAAACCCCGGAGTGGGGTTATCTCTGGACATCAACGGGCTCCTTCTAGGGAGCTGCCCCCCGCAGCTGGTCGGAGGTGTAGCGGTCTTTCAATCGGGCCTGCTTGATTGCCGCTTTATGCGCATTGCAACGGCAAATGTAACCATGTACATAAACGTACTGACGTACATGCCCTCCTCGGGGGTGACACAGTTATTCGAGCGCATTGTCTGTTCCACCTACAAGGCTCCAGACTGGATTCCTCCACTGTATAATCCTGTTCTGGGAGATGCTGATGGATTTGGGTCTCTGGAGTTCAGCATGGCAATTGTAAAAGATGACTTCAGTGGTCCCAGGGTCTCCAGTACATTTTTCCTGGGGTCCCTCATCTTCATCAAGGCTATGGTGGCCCAGCAATCCCACATGCCTCTGGAGCTGTTCTTGGAGGAGTGTGTTGCTGCCAACTCTGCAAATCTGAGTGCTTCAAACCAGACCTACCCAATCATCTCAAACTATGGGTGGGAATACCTGGATATGTCTTCTCAGAACTCCTTGTGCAGCTGTTGTAACACCAACTGCcagcagaggaagaggagagaagcTGGTGACCAGAACATGAGATACAGTGCAGTACTGGGACCAGTGAGGATTGTTCCTGTAGAGCACAAGACCCCGGCTCCAGTTGGGAATGAATCTGCTGTGCCTTTAGTGACCCCATATAATAAAGACTGGCTGCCTTTCTTGGCTGCTCCAGTTGTCATCCTGGCTATACTGGTTGCCCTGTCTCTGGGGTATTTCTGCAAGTGCCACCATGCATTACAACCCCAGTCCAACAAGGACCTTCTCATTCCTACACTGGAT

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018920 True 983 mRNA 0.51 8 25596536 25600663

Neighbor

gene id symbol gene type direction distance location
AMCG00018917 NA coding downstream 43444 25547542 ~ 25553092 (-)
AMCG00018916 NA coding downstream 63180 25489444 ~ 25533356 (-)
AMCG00018910 LOC108239856,LOC107385499,LOC103139559,LOC103366907 coding downstream 258483 25331301 ~ 25338053 (-)
AMCG00018911 ppp1cc,LOC107567955,LOC105902522,LOC108259981 coding downstream 281324 25303537 ~ 25315212 (-)
AMCG00018912 NA coding downstream 294834 25294104 ~ 25301702 (-)
AMCG00018925 slc35e4 coding upstream 743967 26344630 ~ 26356608 (-)
AMCG00018926 NA coding upstream 766687 26367350 ~ 26410785 (-)
AMCG00018928 rasl10a,LOC106584972 coding upstream 1023161 26623824 ~ 26625548 (-)
AMCG00018931 ap1b1 coding upstream 1132604 26733267 ~ 26771289 (-)
AMCG00018933 gas2l1,LOC106580329 coding upstream 1224599 26825262 ~ 26825957 (-)
G119615 NA non-coding downstream 18414 25572054 ~ 25578122 (-)
G119600 NA non-coding downstream 117012 25479010 ~ 25479524 (-)
G119557 NA non-coding downstream 263361 25262362 ~ 25333175 (-)
G119466 NA non-coding downstream 551192 25044951 ~ 25045344 (-)
G119426 NA non-coding downstream 754415 24836787 ~ 24842121 (-)
G119637 NA non-coding upstream 4368 25605031 ~ 25606144 (-)
G119655 NA non-coding upstream 117923 25718586 ~ 25718976 (-)
G119672 tbx3,LOC106563287,LOC106566936,LOC107670392,LOC107566860,LOC107728866 non-coding upstream 419564 26020227 ~ 26068649 (-)
G119673 tbx3,LOC106563287 non-coding upstream 475995 26076658 ~ 26078404 (-)
G119685 NA non-coding upstream 512201 26112864 ~ 26113153 (-)
G119545 NA other downstream 409128 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 424892 25134771 ~ 25171644 (-)
AMCG00018898 NA other downstream 511950 25075398 ~ 25084586 (-)
G119144 NA other downstream 2790198 22804345 ~ 22806338 (-)
G118936 NA other downstream 3482841 22080464 ~ 22113695 (-)
AMCG00018929 NA other upstream 851061 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 1176972 26777635 ~ 26797720 (-)
G119827 NA other upstream 1212817 26813480 ~ 26814073 (-)
G119893 LOC101154678 other upstream 1630210 27230873 ~ 27242574 (-)

Expression


Co-expression Network