AMCG00018926



Basic Information


Item Value
gene id AMCG00018926
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 26367350 ~ 26410785 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00018926
ATggatttttccttctttattttctttgtgataTTCACCTTCGTGTCCAGCAAGCCATGTGAGATTTCCAGTGGAAATGAAGAGCAAATTCTGTCCCTGAACAAGAAGCTGCTACGCTCTGTAAAGGAGGCATCAGAGGGACCCAATCCCAGCCTGCATCTTGGTCTACGACTCTCTCAACATCATAGCCTAGCCTCGGAGAAAGACTACTTGCTCAAGCTAAAGAAAGAGCTTGATGGCATCATCGATAGGTCCCAGTCTAAACTGCAGCCTATTACAGGTCTCCTGGCCCTGTATACCCTAGCCCTGCGTGCTTCCTGTGAGGACCTGAACACCAGCAGCCGGCCGTTGACCAATTACTACCAGTATGGACTGGGAGTGTTGGCACTGTGTGTAGGTGGAGTGCGCATCAGTTCCCACGTTGTTCACAAGCTCATACAGGCACAGAGTAATGGTGGCTTCATGCACAAGGACATTCTCAGCATTGaCACAGTGGCCATGGCAGCACTGGCTTTTCAGTGCCTGAAGGAATCGGATGAACAATACGACGGCAGTCAGATTGAGAAGGCTCTCAGTGCAACACAGCAAGACATCCTGAATTCACAGAGTGACACAGGGTTGTTTGGGAATGTCTTTAGCACACCATTAGCAGTGCAGgcTCTGCAGGCTGTGGGTTCAGAAGGAGCTCTATGTTCTTCTGCCATGCAAGTACTGACGACTGAGATCGGCCGGGGGACTTTCCACAATCCCATGGCCATGTCCCAGCTACTTCCCATCCTGCACTACAAAACCTACTTGGATGTTAGGAGCATGGAGTGCAACGGCGAGGATGATAGCCTGATTCTGGAGTCAAGGACCTCTGTTGTTGAGCTGAGCCAAGAGAGTGTAACTGTTCGGCTGGTGGTGGAGATCACTGATGCCAGCCCTAACATCTACAAAGTGATAGTGCCCTTGGGCTCATCACTGCTTGATGTGCTGAAGGAACTACACAAACAGAAGCCCCAGGAGTTTTCGTTTGAGACAGAGACAAGTCTGTGGGGACCCTACCTGAGTGTGGTAAATGGACTTCGGGCTCGCCAGGCAGATAGAACCTTCTGGCAGCTGCTCCAGTCTCCTGACTCACCTCTTATAGAA

Function


GO: NA

KEGG:

id description
K14619 TCN2; transcobalamin-2

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00018926 True 1134 mRNA 0.50 8 26367350 26410785

Neighbor


gene id symbol gene type direction distance location
AMCG00018925 slc35e4 coding downstream 10742 26344630 ~ 26356608 (-)
AMCG00018920 NA coding downstream 766687 25596536 ~ 25600663 (-)
AMCG00018917 NA coding downstream 814258 25547542 ~ 25553092 (-)
AMCG00018916 NA coding downstream 833994 25489444 ~ 25533356 (-)
AMCG00018910 LOC108239856,LOC107385499,LOC103139559,LOC103366907 coding downstream 1029297 25331301 ~ 25338053 (-)
AMCG00018928 rasl10a,LOC106584972 coding upstream 213039 26623824 ~ 26625548 (-)
AMCG00018931 ap1b1 coding upstream 322482 26733267 ~ 26771289 (-)
AMCG00018933 gas2l1,LOC106580329 coding upstream 414477 26825262 ~ 26825957 (-)
AMCG00018932 NA coding upstream 433985 26844770 ~ 26869193 (-)
AMCG00018938 LOC107673410,LOC107730716,LOC107592308 coding upstream 462109 26872894 ~ 26943014 (-)
G119713 NA non-coding downstream 24272 26319977 ~ 26343078 (-)
G119691 NA non-coding downstream 216279 26119422 ~ 26151071 (-)
G119685 NA non-coding downstream 254197 26112864 ~ 26113153 (-)
G119673 tbx3,LOC106563287 non-coding downstream 288946 26076658 ~ 26078404 (-)
G119672 tbx3,LOC106563287,LOC106566936,LOC107670392,LOC107566860,LOC107728866 non-coding downstream 298701 26020227 ~ 26068649 (-)
G119770 NA non-coding upstream 49833 26460618 ~ 26461160 (-)
G119774 NA non-coding upstream 90216 26501001 ~ 26501920 (-)
G119825 NA non-coding upstream 400099 26810884 ~ 26812556 (-)
G119826 NA non-coding upstream 402329 26813114 ~ 26813426 (-)
G119891 NA non-coding upstream 811721 27222506 ~ 27278009 (-)
G119545 NA other downstream 1179942 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 1195706 25134771 ~ 25171644 (-)
AMCG00018898 NA other downstream 1282764 25075398 ~ 25084586 (-)
G119144 NA other downstream 3561012 22804345 ~ 22806338 (-)
G118936 NA other downstream 4253655 22080464 ~ 22113695 (-)
AMCG00018929 NA other upstream 40939 26451724 ~ 26485315 (-)
AMCG00018930 NA other upstream 366850 26777635 ~ 26797720 (-)
G119827 NA other upstream 402695 26813480 ~ 26814073 (-)
G119893 LOC101154678 other upstream 820088 27230873 ~ 27242574 (-)

Expression



Co-expression Network