AMCG00018937



Basic Information


Item Value
gene id AMCG00018937
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 26943064 ~ 27063981 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00018937
ATGGgtgaacccagGGGATCCGAAACGGCAGCCGGTCTGCCATTTGAAGCCACGGAAATGAGGCATTTTCTGGGTCTCTCGTTGTCCGTGCTGTGCCGGAGGATTTTAGCACTGCTCTTGGTGCTGCTCTCGCTCTCCACCGGAGCACTCTCGACATGGGGAGCCGGACTGTACAAATACCCTTCTGGGATTCAGCATGGGAAGGAGCAACTGGGAGCTACCCATAACGCTGGGTACCAGAGGAGAattgagcaaaacaaaataatgtggcACCTTGCGGGTGATGACCACAGAGCTGGGTTTGTAAACAGACAGGTTCTTAGGGAAGCAGACGGTGAAGGTGATCTGGGCACAGCACTGGCTCCTCCAGTTTTGGAGGCTCCAGCCACAGCAGCAATTCCTCTGGCCCTGGTGAAAGTGTCCCCAAACAGGAACTGGTGTCCCTACTCCGTAACCAAGACGGTGACATGTCAGGTGCAGAATGGTACTGTTCTCCAGCGTGTGTACCAGAGTTGTCGCTGGCCTCAGGGCTGCACTGGAGGCAGTTACCGCACGGTGGTCAGACCCTCCTACAAACTGGCCTATCGCACTGTGACTGCCTTGGAGTGGAGATGCTGTCCAGGATTTCGAGGCACCCACTGTGAGGAAGAATCAGGAAATCATCTGGAAGTCCAGGAGGCTGTGAGGAAGCAAGCAATCCTCCGTAGGCCACTGACCCGAACTGGTGACCTTCTCTCAAGTTGTTTGAACTGCAGTCGAATTGCTGCACTGACTAACAGGCTGAACTCGCTGGAAGCCAAGGTTATCCTGCTGTCTGTGCCCTCTTCCCCCTCACATCACAATTTACAGGCCAAGGGGAACTCTGCAGGGGAGTCATATTCCCTTCTGGGGGTGCCACCTGCACAGGGTATCCCTGGATTACAGGGGCCAGTGGgtccgcagggagagagggggaaagatGGCATTCCTGGAAGGGACGAAGTATTGTCAAGGCTGGGCAGTGGACAGGATGTTCGGACCCAAATGCGGAAGCACAGGGTGGGGCCGGAGACAGGCAAGGGGTCGAAACCAGCAAACAGAGTCCAGAGGGAGATCCAGTAG

Function


GO: NA

KEGG:

id description
K24248 EMID1; EMI domain-containing protein 1

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00018937 True 1101 mRNA 0.56 12 26943064 27063981

Neighbor


gene id symbol gene type direction distance location
AMCG00018938 LOC107673410,LOC107730716,LOC107592308 coding downstream 50 26872894 ~ 26943014 (-)
AMCG00018932 NA coding downstream 73871 26844770 ~ 26869193 (-)
AMCG00018933 gas2l1,LOC106580329 coding downstream 117107 26825262 ~ 26825957 (-)
AMCG00018931 ap1b1 coding downstream 171775 26733267 ~ 26771289 (-)
AMCG00018928 rasl10a,LOC106584972 coding downstream 317516 26623824 ~ 26625548 (-)
AMCG00018940 NA coding upstream 153181 27217162 ~ 27224946 (-)
AMCG00018947 LOC106585515 coding upstream 235609 27299590 ~ 27371370 (-)
AMCG00018948 rasal1,LOC106579924,LOC106585515 coding upstream 318022 27382003 ~ 27396226 (-)
AMCG00018946 NA coding upstream 489445 27553426 ~ 27567410 (-)
AMCG00018953 NA coding upstream 744161 27808142 ~ 27841558 (-)
G119826 NA non-coding downstream 129638 26813114 ~ 26813426 (-)
G119825 NA non-coding downstream 130508 26810884 ~ 26812556 (-)
G119774 NA non-coding downstream 441144 26501001 ~ 26501920 (-)
G119770 NA non-coding downstream 481904 26460618 ~ 26461160 (-)
G119713 NA non-coding downstream 599986 26319977 ~ 26343078 (-)
G119891 NA non-coding upstream 158525 27222506 ~ 27278009 (-)
G119912 NA non-coding upstream 291844 27355825 ~ 27356032 (-)
G119929 NA non-coding upstream 401406 27465387 ~ 27468649 (-)
G119944 NA non-coding upstream 442527 27506508 ~ 27507199 (-)
G119945 NA non-coding upstream 454631 27518612 ~ 27519715 (-)
G119827 NA other downstream 128991 26813480 ~ 26814073 (-)
AMCG00018930 NA other downstream 145344 26777635 ~ 26797720 (-)
AMCG00018929 NA other downstream 457749 26451724 ~ 26485315 (-)
G119545 NA other downstream 1755656 25186207 ~ 25187408 (-)
G119538 LOC108444117,LOC105014832,LOC106563153 other downstream 1771420 25134771 ~ 25171644 (-)
G119893 LOC101154678 other upstream 166892 27230873 ~ 27242574 (-)

Expression



Co-expression Network