AMCG00018948 (rasal1,LOC106579924,LOC106585515)


Basic Information

Item Value
gene id AMCG00018948
gene name rasal1,LOC106579924,LOC106585515
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 27382003 ~ 27396226 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00018948
ATGAATCTGACACAGGTGGACCCAGATGAAGAGGTACAGGGAGAGATTCACCTTGgcctggagctgctgcaggacaCCCCCAGGACAAGTCTGCGGTGCCACGTCATTGAGGCCAGAGACCTGGCTCCTCGAGATATCTCAGGCACCTCGGACCCCTTTGCTCGAATCCTGTTCAACAACCGGAGTGCTGAGACCTCGATCATCAAAAAGACACGCTTTCCCCACTGGGATGAGCTGCTGGAGCTGCAACTGCAGACAGAGGAGATGTCAGAGCAGGCCTGCATCACTCTGGAGGTGTGGGACTGGGATATGGTGGGGAAGAACGATTTCTTAGGGAAGGTGGAGATCCCTCTGGCTTTCTTGTACAAGACACCCCTTTTGCAGGGCTGGTTCCGGCTGCTGCCTCTGGGAAACACTGAGGATGATGCAGGGTGA

Function

symbol description
rasal1 Predicted to enable GTPase activator activity; metal ion binding activity; and phospholipid binding activity. Involved in positive regulation of dendrite extension. Located in cytosol. Colocalizes with plasma membrane.

NR:

description
PREDICTED: rasGAP-activating-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00018948 True 435 mRNA 0.56 4 27382003 27396226

Neighbor

gene id symbol gene type direction distance location
AMCG00018947 LOC106585515 coding downstream 10633 27299590 ~ 27371370 (-)
AMCG00018940 NA coding downstream 157057 27217162 ~ 27224946 (-)
AMCG00018937 NA coding downstream 318022 26943064 ~ 27063981 (-)
AMCG00018938 LOC107673410,LOC107730716,LOC107592308 coding downstream 438989 26872894 ~ 26943014 (-)
AMCG00018932 NA coding downstream 512810 26844770 ~ 26869193 (-)
AMCG00018946 NA coding upstream 157200 27553426 ~ 27567410 (-)
AMCG00018953 NA coding upstream 411916 27808142 ~ 27841558 (-)
AMCG00018952 NA coding upstream 466559 27862785 ~ 27878157 (-)
AMCG00018955 NA coding upstream 553486 27949712 ~ 27963857 (-)
AMCG00018954 NA coding upstream 578766 27974992 ~ 27984938 (-)
G119912 NA non-coding downstream 25971 27355825 ~ 27356032 (-)
G119891 NA non-coding downstream 103994 27222506 ~ 27278009 (-)
G119826 NA non-coding downstream 568577 26813114 ~ 26813426 (-)
G119825 NA non-coding downstream 569447 26810884 ~ 26812556 (-)
G119774 NA non-coding downstream 880083 26501001 ~ 26501920 (-)
G119929 NA non-coding upstream 69161 27465387 ~ 27468649 (-)
G119944 NA non-coding upstream 110282 27506508 ~ 27507199 (-)
G119945 NA non-coding upstream 122386 27518612 ~ 27519715 (-)
G119956 sf3a1 non-coding upstream 175028 27571254 ~ 27572829 (-)
G119981 NA non-coding upstream 277620 27673846 ~ 27674566 (-)
G119893 LOC101154678 other downstream 139429 27230873 ~ 27242574 (-)
G119827 NA other downstream 567930 26813480 ~ 26814073 (-)
AMCG00018930 NA other downstream 584283 26777635 ~ 26797720 (-)
AMCG00018929 NA other downstream 896688 26451724 ~ 26485315 (-)
G119545 NA other downstream 2194595 25186207 ~ 25187408 (-)

Expression


Co-expression Network