G114018


Basic Information

Item Value
gene id G114018
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 468788 ~ 472124 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142757
GGGGGAAGAAAAGAGCTACTTGGGTGATGGTCTTCAGTGAGTCATTCGAGCCACTGGAGCTGCCCAAGGTCAACGCGGAGGCCTTTGTGGTGGGACTGAGACCAGATATCATTCTTCCTTCAGGGTGTCCCTCCAGCACTCGCTCTTGGTAGCCTAGTCATGTGCACTGTCGGCCAAAAACTAGAAAAAGAAACCTTCTGAGCTGAAGGAGTTTAATTTATAGTGTGTTTCACAGATGCCTGTGAGGGTCACGGACTCTGCTGAACACATAGAGCGATACGCTGccgtttgttgttgtttttttttttttaaatctttcgCAACCCAGTGCCTTAAAGCGAATGCGCGGTGGGCCGCCCCAGCACTGAGGGTCCGACCAGAGCCCAGGACGGATGTTGTAATGATCAGTCTTAGTCACGGGTATGTTTAGCAAGAGGAGAGATTAAATGGATTTGACGAACTACCCTCCACTGGCCCCCTCAGTGGAAAACTATGTGGCTAAACACTGTTATTCTTTAATTCATATGGTTTTCTCATAGCATTTTGATTCAGATAGAGGGAacgaaagaagaaaaaaactaaaaaggaataaaaaactAGGGGCACAGGGGCAGTGTAGAtgagaatttgttttgttttgctttgtggctCCAgtgtctccctctgtccctgAGAGGAGATCGTAAAGGTGATCATCTGTTTAATCGGCAGCTGTGAAGTAACCAGGTCTTGTGCCGCCCGTCCCCAATAATTCACACAGACCTGTAGCTCCTCCTGCAGTGGGATGGGGCCATGGGCCGACTCCTGTAAGAGGAGATAATGAGAGGCATCGTGTTTGCACATGTTCCCCTCTCCATGAGTTTCCATGACCAGTGACCTTCTTCCACTGTATCAATCTTGAAAATCCTAAAACGTAATCTGGAGAGAACAAGAGATCCTGattgtgtgtgcctgtgtatatagtgtgtgtgtgtgtgccgagctctggactgtgtgtgtgagtcctTTTGTTATGAAGAAAACTTATCtgaaaaacacttatttagcaaaaaaaacttatttcttcaaattagtaaataaaataaaatcaacaaacgGTAAACTATTTTCTAactaaatggagaaaagtatatgtatattgtaaataaatgtatgccgTATCTTTTCTGATTGTCTTCCTTACTGGATATTGTTGTAACCCCGACCCAGCATATTTGTACTGCTACTTTAGTATTATTaccaaacaaaactgaaaaagaaaacctgtcTGTGTGAGGGATGCAGAGGTGGCCCAGATGTTTAGATATTCTGTTgggatttttatttgatttgtttggttgtttgcccatattgcattatattgacCAAGTCTGCTCTTACTATATGACcagtattgttaataataatgtcacTACGGTTATATTTATTGGTCGAGAGTTGAGACAGATCCTGGTGACGGACGGTGTGTCAGAGCGGCTCGATTGAGCTCCACTGATGGCAGCTGCCGAACAGTAGTTTTGCCTCCGTCTGTTCGTCAGTGTGATGAGAGCGAACGTGACCAGCCTGCCCTGCGTTCGGCCCTACCGCCCCCCTTGCTCTAATCTGTGTCTGAATGTCCCCGTCAGTCTGGCGAAGGAGAAAAGATACCGGCTCTCAAAATAGCTCTGGCCGAGTCCACTATCTCCTGCCTGTGGGGCCCTCTCTCCGAGTGTGACTGTTCTGCACTATTTTTATGATCGTCcttgttggggtgggggggcaggttTCTCTGGACAGGTAATTCCAGTGGTGTTGGAGTTCAGCCCAGTTTTTCTGGTTATTGTATGTTGTGGTGATGGGGTATCGCTCTAGTGGAGGGAGGAAGGGACAGGGCAAGGGAGACACCATCTTCCCAGAGGACGGCAGGACAATGCTGAGGGCCGAGGGGTCGACAGGGGCCCCACTTCCTCTGTGGACACTGCTCTAACCACACCGGGGGGACAGAAAACCATAATGGTCCCCCTCTCTGCATGTGCCTGAGTGCACAATTGTGGATGAGTTTAGTTCGTGCCGGTTTCCcttggcttttattttttctgcccCCCCGGTCTGGTTCTGTCATCTCAAGGCCCTCTGTCCCTCAGTGCAGTCTTTCAAAGTTAATACATTTCCCTCTGAAAGATCCCGTCTGAAATGGATTCCATCTGGACTAGCGGACGGGCCGCACACAGAGGCCGGTGCCTGTGAATTTACTTTCTGGTGTTTATCTGCAGCTTCAATCTCAGCCTGACTGCGGGGAGAGAGAGCCTCGTCATGTGGGGAGCGGGGCGTGAGACTCGCGGACCCAGAGCGGGCTTTTCCCATCGTGCCGGGgctgtggagggagggagagagcgagagagagcgagagagagcgagagagagaggggcagcaGCTGTGCGGAgtgcgaggaggaggaggaggaggaggagtcaGGCCTGAGGTTTATGGCAATTAGGGAAAAATAACAGGAATGTTGGCCGAGAggggttgtgttgttgttgagaTTCAGTCACAATGTGTAATAACCGACAGCACAGGGAAAGCCAGGGGGGCCGGCTGAGCCAAACCAGCACCGAACACGCGCTGACACTCCCTGCCACGGCTCGGCGGGGGGGTCGGTTtctcctgcagtgtgtgtgtgtgaacttgTAAATTTCAGCTctgctcccacacacacacactcgcacggCTCCAACTGCACTGAAATATCCTCACCGAGGTTTCAATCAGCagccaaacaaacaagcaaacaaaaagactaaaaataaagacacaaatcATGCTGAGAAGGTCTGTGAATGGCTGGGGGGGAAGttgtcattgtatttgtttagtttgtcaTCTGGGTGAGATGTTGGGTgggtatagagagagagacagaaagctGCTGCTCACTACGAATGTCTGACGTTCACTGTTGCTGCGCCCCCCCGAGCTCGGCCAGCCTGGCACTGAGTGCGTTGGGATTTCGTTGTTATTGTTGCCGTTTGTTTCTTTAGGGGTCATAAACTGCCTGGAGACGACGCAGCGATGCCTCAGATTGAGCTGCCGGTCCCTCTCGTGTtatcacccccccacacacacacacacactgtaccgCATCCAGGAACTGACAGCACCCCCACCCTCTGCCCCGCTGTGATTGTAAGAAAGGTATTCCTTGACtgtaaaaagtgtttaaatctGAAACTGATGAACTGTCTTGCAgttgttttgtatatatgagctgtataaatacattaaatgtactttatgtTGACTGGAT

Function

GO:

id name namespace
GO:0050780 dopamine receptor binding molecular_function
GO:0001664 G protein-coupled receptor binding molecular_function
GO:0031752 D5 dopamine receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142757 True 3287 lncRNA 0.49 2 468788 472124

Neighbor

gene id symbol gene type direction distance location
AMCG00018043 gna12,gna12a,LOC107758336,LOC107703403,LOC107674729 coding upstream 794 465505 ~ 467994 (+)
AMCG00018046 gna12,gna12a,LOC107674729,LOC107753491,LOC107703403 coding upstream 23738 440190 ~ 445050 (+)
AMCG00018045 gna12,LOC106593785,LOC106535814 coding upstream 38157 429053 ~ 430631 (+)
AMCG00018044 LOC107592484 coding upstream 50108 391725 ~ 418680 (+)
AMCG00018038 NA coding upstream 439102 25688 ~ 29686 (+)
AMCG00018051 eif3b,eif3ba coding downstream 17995 490119 ~ 499466 (+)
AMCG00018050 NA coding downstream 29418 501542 ~ 513021 (+)
AMCG00018053 NA coding downstream 41216 513340 ~ 513737 (+)
AMCG00018049 NA coding downstream 44412 516536 ~ 520955 (+)
AMCG00018057 NA coding downstream 102980 575104 ~ 575385 (+)
G114056 NA non-coding downstream 81086 553210 ~ 553504 (+)
G114205 NA non-coding downstream 690768 1162892 ~ 1178095 (+)
G114237 NA non-coding downstream 794716 1266840 ~ 1268893 (+)
G114253 NA non-coding downstream 818431 1290555 ~ 1291851 (+)
G114274 NA non-coding downstream 1061351 1533475 ~ 1534982 (+)
G114053 snn,LOC107703342,LOC107564698 other downstream 103136 575260 ~ 579704 (+)
G114123 NA other downstream 305259 777383 ~ 794790 (+)
AMCG00018072 LOC107720077 other downstream 399197 871321 ~ 889033 (+)
G114219 NA other downstream 747655 1219779 ~ 1220216 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other downstream 1475717 1947841 ~ 1949593 (+)

Expression


Co-expression Network