G114056


Basic Information

Item Value
gene id G114056
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 553210 ~ 553504 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU142803
aaattgagaacaagggcagtgatgttcagactgtacaatgcactagttagagctcatctggatactgtggacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaacatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU142803 True 295 lncRNA 0.47 1 553210 553504

Neighbor

gene id symbol gene type direction distance location
AMCG00018049 NA coding upstream 32255 516536 ~ 520955 (+)
AMCG00018053 NA coding upstream 39473 513340 ~ 513737 (+)
AMCG00018050 NA coding upstream 40189 501542 ~ 513021 (+)
AMCG00018051 eif3b,eif3ba coding upstream 53744 490119 ~ 499466 (+)
AMCG00018043 gna12,gna12a,LOC107758336,LOC107703403,LOC107674729 coding upstream 85216 465505 ~ 467994 (+)
AMCG00018057 NA coding downstream 21600 575104 ~ 575385 (+)
AMCG00018052 snn,LOC107703342,LOC107564698 coding downstream 24544 578048 ~ 578311 (+)
AMCG00018060 NA coding downstream 50826 604330 ~ 609917 (+)
AMCG00018061 LOC106607234 coding downstream 58985 612489 ~ 615795 (+)
AMCG00018062 NA coding downstream 69474 622978 ~ 637087 (+)
G114018 NA non-coding upstream 81086 468788 ~ 472124 (+)
G114205 NA non-coding downstream 609388 1162892 ~ 1178095 (+)
G114237 NA non-coding downstream 713336 1266840 ~ 1268893 (+)
G114253 NA non-coding downstream 737051 1290555 ~ 1291851 (+)
G114274 NA non-coding downstream 979971 1533475 ~ 1534982 (+)
G114299 NA non-coding downstream 1311053 1864557 ~ 1865570 (+)
G114053 snn,LOC107703342,LOC107564698 other downstream 21756 575260 ~ 579704 (+)
G114123 NA other downstream 223879 777383 ~ 794790 (+)
AMCG00018072 LOC107720077 other downstream 317817 871321 ~ 889033 (+)
G114219 NA other downstream 666275 1219779 ~ 1220216 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other downstream 1394337 1947841 ~ 1949593 (+)

Expression


Co-expression Network