G114320 (adap1,LOC108228240,LOC107388258,LOC102218716)


Basic Information

Item Value
gene id G114320
gene name adap1,LOC108228240,LOC107388258,LOC102218716
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 1947841 ~ 1949593 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143157
tggaaaatgaattaaaagcaTGCGTGGGAGTCGGGCAAATCAGATTTTACTCATTGCACCCCCCCGTGGAGATGTTCTCAATCATTGTCTTGATCAACTCCATagctttgaggaaaaaaaaaaaagaataaaaacttGTCACAAGACCCAGGGtaggattgttttttatttaacacagacCGTCTCGATTGTTAAGAACAATGCGTGCATTCCAGCTGCAAGAGGCCGTCCTAGTGTTCAAGTGCGTGTCAGAAGGCCGGGACCCTCTGGTCCATCCTGCAGCGAAGTCCCGCATCAGGTCTGGACACAGCTGGCCAGATGTGAGCGCTTGCCGATGGAGTTTGTGTTTAGCAACGGTCAGACAAAAGAAATTCACAGTCCCACACTAGATTAAAAGGTCACAGGCCTgagcaaaataaaacctgattatGTACAAATATCAGACACAATAAATACCACGCTCTCCACCCTGTGTAGTAGGTTAATGTTCTCCAGTGTTCACACCGCTATTAATGTATCTAGGCTTTTAGGCAAACGCTATGACAGCTAATAGCTTGTTACACATCACTTTCAACTGACACCAATTGCATTAGACGACATTAATTAAAGTACTATTTTAACAACAGCCACGGTGGAGGTACAGTACGTGAGTGGACCACGTTGGCACAGACTGAGGGGGTGTGTTTTGCAAGGGAAGGCGGGGGGGAGGGTCCACGCAGGCTCCAGtagtgcccccccacccccattcccTCTGAAGAGCAGCCAACCCCTCCCTCGGCCGATGCCTGGAGCCTttatacagatttaatttaattgaacttcatttaaatgaaatcgTCGGTCCGTTTTCTCCAGCAtcgtaaacaaaaaaaagagtcCGTCTTCCCCACAGCGGCTCCGCAGACGAGCTGTCGTCTCCGGCCCGGTCCGAGGGGCGTCTCTGGCCGTCCTCTCCCCCGACTCCTCAGGGTTTGTGTTTAAAGTGCGCCTCCATGCGTACTCCTGTGGGAGCATCGGCCGGTTGATGACTTTCTGGAAAGCAGCGATCCAGGCGCGCTGGTCCAGCTCCGTCTCGCAGGCGAAAAGGAACTTCCTGTCCGGAGTGACGATGGTGATGCCGAACTGCCAGTGCTGCCCCTGCGTGGAGGGCGGGAGGCCGGCCAGCACCGTGTAGTTGTTCTCTTTGCTCCCGATGAACACTTCCCCGCGAGCGTAGGCGTCAAGGGATCTTTGAAGTACATTAA

Function

symbol description
adap1 Enables GTPase activator activity. Involved in regulation of GTPase activity. Located in cytosol; nucleus; and plasma membrane.

NR:

description
uncharacterized protein LOC100142646

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143157 True 1244 TUCP 0.51 3 1947841 1949593

Neighbor

gene id symbol gene type direction distance location
AMCG00018102 ttyh3,LOC106607330,LOC106601124 coding upstream 100931 1811435 ~ 1846910 (+)
AMCG00018104 NA coding upstream 145613 1796402 ~ 1802228 (+)
AMCG00018096 NA coding upstream 168182 1770156 ~ 1779659 (+)
AMCG00018097 nudt1,8odp coding upstream 195776 1749229 ~ 1752065 (+)
AMCG00018091 elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding upstream 436469 1508994 ~ 1511372 (+)
AMCG00018115 NA coding downstream 130591 2080184 ~ 2095126 (+)
AMCG00018114 NA coding downstream 145962 2095555 ~ 2104782 (+)
AMCG00018116 NA coding downstream 167022 2116615 ~ 2118790 (+)
AMCG00018121 NA coding downstream 250842 2200435 ~ 2203330 (+)
AMCG00018120 LOC106601835,LOC107695711 coding downstream 261916 2211509 ~ 2212924 (+)
G114299 NA non-coding upstream 82271 1864557 ~ 1865570 (+)
G114274 NA non-coding upstream 412859 1533475 ~ 1534982 (+)
G114253 NA non-coding upstream 655990 1290555 ~ 1291851 (+)
G114237 NA non-coding upstream 678948 1266840 ~ 1268893 (+)
G114205 NA non-coding upstream 769746 1162892 ~ 1178095 (+)
G114321 NA non-coding downstream 668 1950261 ~ 1950500 (+)
G114322 NA non-coding downstream 1622 1951215 ~ 1951599 (+)
G114323 NA non-coding downstream 3281 1952874 ~ 1953264 (+)
G114326 NA non-coding downstream 20187 1969780 ~ 1970409 (+)
G114332 NA non-coding downstream 34058 1983651 ~ 1984150 (+)
G114219 NA other upstream 727625 1219779 ~ 1220216 (+)
AMCG00018072 LOC107720077 other upstream 1058808 871321 ~ 889033 (+)
G114123 NA other upstream 1153051 777383 ~ 794790 (+)
G114053 snn,LOC107703342,LOC107564698 other upstream 1368137 575260 ~ 579704 (+)
AMCG00018105 NA other downstream 23245 1972838 ~ 1973924 (+)
G114330 NA other downstream 27411 1977004 ~ 1978727 (+)
AMCG00018106 NA other downstream 29453 1979046 ~ 1982566 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other downstream 298260 2247853 ~ 2266775 (+)
G114518 NA other downstream 541720 2491313 ~ 2568938 (+)

Expression


Co-expression Network