G114330


Basic Information

Item Value
gene id G114330
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 1977004 ~ 1978727 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143170
CACAATCAATGGCAAGGAGCTCTTGGGTTCAGTGGAACCGGCAGCTGCTACTGACACCCTTCACGCGAACGCGGCGGCGCCGAGATGATCGGAATTCGTACTTTGAGCGCGAGCGGCGCCGGTTGTCATGGCGGCGGCGGCCGGGGCTGGGCGAGCcggaggagctgctgctgctggagctgcgGGACGAGGAGGACGAGCCGGAGCGGCTGGACGCGGAGGTCGAGCTGGAGCCGCTGGACGAACCCGAGCTGGAGCccgagctggagctggagctggagctggagcgaGACcggctgctgctgctccctgTGGACGCGCTGCGGCGCTTGCGGCCCTTCTCTCTGCCCCGCTCCTTGTCCCCGCCGGCCTCCTTCGTGCCCGTCTTCTCCTTCCCGCGCTCCTTCGGCTTGTCCTCGGAGCGGTCCTTTCGTTTCGTAGGTGACGGCGCCaTCTTTCCCGTAGTAAAAAATG

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143170 True 474 TUCP 0.67 3 1977004 1978727

Neighbor

gene id symbol gene type direction distance location
AMCG00018102 ttyh3,LOC106607330,LOC106601124 coding upstream 130094 1811435 ~ 1846910 (+)
AMCG00018104 NA coding upstream 174776 1796402 ~ 1802228 (+)
AMCG00018096 NA coding upstream 197345 1770156 ~ 1779659 (+)
AMCG00018097 nudt1,8odp coding upstream 224939 1749229 ~ 1752065 (+)
AMCG00018091 elfn1,elfn1a,LOC107703384,LOC107674694,LOC107572165 coding upstream 465632 1508994 ~ 1511372 (+)
AMCG00018115 NA coding downstream 101457 2080184 ~ 2095126 (+)
AMCG00018114 NA coding downstream 116828 2095555 ~ 2104782 (+)
AMCG00018116 NA coding downstream 137888 2116615 ~ 2118790 (+)
AMCG00018121 NA coding downstream 221708 2200435 ~ 2203330 (+)
AMCG00018120 LOC106601835,LOC107695711 coding downstream 232782 2211509 ~ 2212924 (+)
G114326 NA non-coding upstream 6595 1969780 ~ 1970409 (+)
G114323 NA non-coding upstream 23740 1952874 ~ 1953264 (+)
G114322 NA non-coding upstream 25405 1951215 ~ 1951599 (+)
G114321 NA non-coding upstream 26504 1950261 ~ 1950500 (+)
G114299 NA non-coding upstream 111434 1864557 ~ 1865570 (+)
G114332 NA non-coding downstream 4924 1983651 ~ 1984150 (+)
G114346 NA non-coding downstream 28179 2006906 ~ 2021630 (+)
G114359 NA non-coding downstream 69844 2048571 ~ 2050177 (+)
G114484 NA non-coding downstream 431750 2410477 ~ 2412789 (+)
G114485 NA non-coding downstream 438080 2416807 ~ 2417796 (+)
AMCG00018105 NA other upstream 3080 1972838 ~ 1973924 (+)
G114320 adap1,LOC108228240,LOC107388258,LOC102218716 other upstream 27411 1947841 ~ 1949593 (+)
G114219 NA other upstream 756788 1219779 ~ 1220216 (+)
AMCG00018072 LOC107720077 other upstream 1087971 871321 ~ 889033 (+)
G114123 NA other upstream 1182214 777383 ~ 794790 (+)
AMCG00018106 NA other downstream 319 1979046 ~ 1982566 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other downstream 269126 2247853 ~ 2266775 (+)
G114518 NA other downstream 512586 2491313 ~ 2568938 (+)
G114551 NA other downstream 662119 2640846 ~ 2647774 (+)
AMCG00018196 NA other downstream 2207683 4186410 ~ 4193330 (+)

Expression


Co-expression Network