G114553


Basic Information

Item Value
gene id G114553
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2668460 ~ 2668661 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143461
TGGCGTCCAAAATGGTTAAATTTCCTTTTGAAACATTGAGTTTGAAATGCCTTGTGAATAGTACAGTGCAGACATCACTGGCTGGGTTTTGAGATCTGTCTTCCTCATTTCATCTGACTGTATTAAGTCTGTTGCGTTCGTCTCAGtctaaaatgtatgattatGTCTATACCAATAAATGCACATCATGAATTGTAAAGTC

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU143461 True 202 lncRNA 0.37 1 2668460 2668661

Neighbor

gene id symbol gene type direction distance location
AMCG00018138 NA coding upstream 89103 2574395 ~ 2579357 (+)
AMCG00018132 NA coding upstream 203702 2449789 ~ 2464758 (+)
AMCG00018130 LOC105893914,LOC107598040,LOC107571734 coding upstream 224932 2434456 ~ 2443528 (+)
AMCG00018133 NA coding upstream 234804 2433398 ~ 2433656 (+)
AMCG00018131 NA coding upstream 235478 2421265 ~ 2432982 (+)
AMCG00018146 NA coding downstream 30167 2698828 ~ 2717437 (+)
AMCG00018145 NA coding downstream 48841 2717502 ~ 2747393 (+)
AMCG00018144 NA coding downstream 114401 2783062 ~ 2786522 (+)
AMCG00018149 LOC107753764,LOC107661878,LOC107718604 coding downstream 119712 2788373 ~ 2793873 (+)
AMCG00018150 NA coding downstream 145786 2814447 ~ 2827770 (+)
G114548 LOC104962440 non-coding upstream 59048 2609143 ~ 2609412 (+)
G114531 NA non-coding upstream 94593 2573637 ~ 2573867 (+)
G114485 NA non-coding upstream 250664 2416807 ~ 2417796 (+)
G114484 NA non-coding upstream 255671 2410477 ~ 2412789 (+)
G114359 NA non-coding upstream 618283 2048571 ~ 2050177 (+)
G114555 NA non-coding downstream 2246 2670907 ~ 2742686 (+)
G114613 NA non-coding downstream 175644 2844305 ~ 2845453 (+)
G114624 NA non-coding downstream 196327 2864988 ~ 2867237 (+)
G114629 NA non-coding downstream 213771 2882432 ~ 2882968 (+)
G114674 ubfd1 non-coding downstream 433505 3102166 ~ 3103170 (+)
G114551 NA other upstream 20686 2640846 ~ 2647774 (+)
G114518 NA other upstream 99522 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 401685 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 685894 1979046 ~ 1982566 (+)
G114330 NA other upstream 689733 1977004 ~ 1978727 (+)
AMCG00018196 NA other downstream 1517749 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 1926272 4594933 ~ 4604105 (+)
G115049 NA other downstream 2092857 4761518 ~ 4763905 (+)
G115299 NA other downstream 3280802 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 3486827 6155488 ~ 6160616 (+)

Expression


Co-expression Network