G114613


Basic Information

Item Value
gene id G114613
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 2844305 ~ 2845453 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143537
GGACCGCCTGAGCCACAAACATGTCGACCTCGCTGCGGTACCCCCGGGAGGCCGAGTACTCCACCAGCATCTTGGCACAGCCCTCCCCGTCAGAGGAGTGCAGGAAGTGGTAGCGAGACTCACTGTAGTTTTGCTCTGGGCGGCCAAATcgacaacaacacacaacacacagaaagacagagtgGTTATTCCTTTGGGCTGACATTGTCCTCGTgttatagtttgtttgttagtttgtgtgtgtgtgttctggcccgGGCCGTACCTTTCCATAGTGTGACTGCGAGGAGCTGGTGCAGCTTGGGATGGCCCAGTTTGCCCGATCCACCACTGGACCACTTAAGTGCTCTGGAGACGAAGGCTACTCTCTCTGGGGAGTTGGGATCCATCTGGCTAAACAGCTTTGCCAAGTGTTCTGCTAAATTTCATCTACTACTTTGGTGTCTGACTTCTCCAGGGACTCCAGCACCAGCATGGACAGATCTGCAGCGCTGTTTTGCTGTGAAAGGAGATTGTACATGTAGTTCCTATTTGATGAATGCATGCAAATTGTACCTCCATTGTATGGCAATAGTGTAACTGAACTCCTAACAGCTTTATTGCTAATATGGAAGGGAAAGTCAGGGTGTGAaaccaattcaattatttaagtCACTCTCAGCTGGGAGTTTGTGTGCAGCTGTTTTCAATGAACTTGAAAGGGTTTTTATTAGGATTCAATTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143537 True 726 lncRNA 0.48 2 2844305 2845453

Neighbor

gene id symbol gene type direction distance location
AMCG00018150 NA coding upstream 16535 2814447 ~ 2827770 (+)
AMCG00018149 LOC107753764,LOC107661878,LOC107718604 coding upstream 50432 2788373 ~ 2793873 (+)
AMCG00018144 NA coding upstream 57783 2783062 ~ 2786522 (+)
AMCG00018145 NA coding upstream 96912 2717502 ~ 2747393 (+)
AMCG00018146 NA coding upstream 126868 2698828 ~ 2717437 (+)
AMCG00018148 NA coding downstream 34115 2879568 ~ 2881846 (+)
AMCG00018155 NA coding downstream 66168 2911621 ~ 2915341 (+)
AMCG00018156 prkar1b,LOC104941536 coding downstream 79962 2925415 ~ 2934755 (+)
AMCG00018163 NA coding downstream 101981 2947434 ~ 2948696 (+)
AMCG00018158 prkar1b,LOC107653458,LOC107661853 coding downstream 104438 2949891 ~ 2965319 (+)
G114555 NA non-coding upstream 101619 2670907 ~ 2742686 (+)
G114553 NA non-coding upstream 175644 2668460 ~ 2668661 (+)
G114548 LOC104962440 non-coding upstream 234893 2609143 ~ 2609412 (+)
G114531 NA non-coding upstream 270438 2573637 ~ 2573867 (+)
G114485 NA non-coding upstream 426509 2416807 ~ 2417796 (+)
G114624 NA non-coding downstream 19535 2864988 ~ 2867237 (+)
G114629 NA non-coding downstream 36979 2882432 ~ 2882968 (+)
G114674 ubfd1 non-coding downstream 256713 3102166 ~ 3103170 (+)
G114699 NA non-coding downstream 322710 3168163 ~ 3168982 (+)
G114731 NA non-coding downstream 391590 3237043 ~ 3237244 (+)
G114551 NA other upstream 196531 2640846 ~ 2647774 (+)
G114518 NA other upstream 275367 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 577530 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 861739 1979046 ~ 1982566 (+)
G114330 NA other upstream 865578 1977004 ~ 1978727 (+)
AMCG00018196 NA other downstream 1340957 4186410 ~ 4193330 (+)
AMCG00018216 telo2 other downstream 1749480 4594933 ~ 4604105 (+)
G115049 NA other downstream 1916065 4761518 ~ 4763905 (+)
G115299 NA other downstream 3104010 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 3310035 6155488 ~ 6160616 (+)

Expression


Co-expression Network