G114720


Basic Information

Item Value
gene id G114720
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 3140095 ~ 3141310 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU143670
TACGGTCCTAACTAAATACAACTGAGCCTTGAACAcgtcatttcagtttttcagaaacCAGGAAGAATACAGGTAGTAAAATTTAAACTTTAACAGCATTCATTGCTATGATgtcttattcattcattttgtactgGTGATAGGAAAGGCTGAAACGagcaaaaggaaaatatttatcttagcagtgaaaacaaattaaaaccgtgtgattttttttcttttactcagAGGACTGTATTGGACTGTTGCCTGCTGCAGTATTTCAACACACTAGGGTGGGTCcacaattacaataattgtattatatgtcCTCAAAGTGTATCGGTTGTATTTGAAGAACTAGTTTAGGTTTTTCCCTGTCACATTCACAAGTGGGtgagttttgaaattaaaatgttaaatatcctCATGTTTTTCTTACActaattacttaaaaatatttcagcaaTTACATCCTGACACTTTTTTCCCCAGGGTATCCTCAGGGTTTTTGTCCATCACACATCTCTTACCTGCTACTAAAAAACAAGCTTTTTCTAAACCTTGCTTCCTGTTCACAAACGCTGAAGTCATTATTGTTCAACCTGAGTCATGTGGTTTACCATAGTATGATGGAAGAGTTGTGTTGTAGCAGATGCATTTCTTCAATGTCAAATTGAGCTGTATGGTGgcaaacaccacacacacacacacacagagttatccatacattgttgttgttttttaaatttagtatGAATTTGAATGCCATGTGTACTGAAAACAACATTCCCCTGGTGCGGTTTCATACCTCATGACTGATGATCTCACAGTCGATCTCTGTAACTGGAGAAGTTCAGGGGAACTGGTCCACCGTCATTGCAGGACCTGCCCATGACACAGCATTAAACAGCGCACCGCTCTCGCATAGAGAGGCGATCAACCTGGCTTGGCTGTTAACCACTGAAATGTATCTGTTACACAGATAAAAAGTAAGATAAAGCTGTCAATGTTTTTACCTCGCTttgcttcagtttattttgaagAGGAGGGTTTAACTTTTCAAATATGACCAATCTGAGACAGCAGAACCCAACTATCAACGGGGTTTAACCCCCAAGACACTGGGTTAATACGCAaggccaataaataaataaatacaattacatccTGCTTGAGTTGGCAGAGCCAGTCTGACGATGTGAATTCACAGCAGAATCCACTCTAAGCTTCACAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU143670 True 1216 lncRNA 0.38 1 3140095 3141310

Neighbor

gene id symbol gene type direction distance location
AMCG00018168 ubfd1,LOC106601113 coding downstream 36653 3099730 ~ 3103442 (-)
AMCG00018162 NA coding downstream 64459 3073189 ~ 3075636 (-)
AMCG00018161 NA coding downstream 71541 3061613 ~ 3068554 (-)
AMCG00018160 NA coding downstream 79790 3058055 ~ 3060305 (-)
AMCG00018157 NA coding downstream 231666 2882488 ~ 2908429 (-)
AMCG00018167 NA coding upstream 1164 3142474 ~ 3150456 (-)
AMCG00018169 NA coding upstream 19921 3161231 ~ 3167163 (-)
AMCG00018170 hs3st4,LOC103360498,LOC107568293 coding upstream 257983 3399293 ~ 3399919 (-)
AMCG00018171 NA coding upstream 340398 3481708 ~ 3483903 (-)
AMCG00018176 NA coding upstream 636865 3778175 ~ 3809520 (-)
G114681 NA non-coding downstream 62335 3077041 ~ 3077760 (-)
G114658 NA non-coding downstream 141837 2996035 ~ 2998258 (-)
G114554 NA non-coding downstream 471434 2668460 ~ 2668661 (-)
G114456 NA non-coding downstream 764360 2368430 ~ 2375735 (-)
G114363 NA non-coding downstream 1155946 1983652 ~ 1984149 (-)
G114739 NA non-coding upstream 259122 3400432 ~ 3401938 (-)
G114785 NA non-coding upstream 766709 3908019 ~ 3910399 (-)
G114915 NA non-coding upstream 1154001 4295311 ~ 4352363 (-)
G114941 NA non-coding upstream 1244623 4385933 ~ 4386891 (-)
G115021 NA non-coding upstream 1447985 4589295 ~ 4590068 (-)
AMCG00018142 NA other downstream 492284 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 530616 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 851233 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 1072511 2006906 ~ 2067584 (-)
AMCG00018113 NA other downstream 1133459 1985149 ~ 2006636 (-)
G114838 NA other upstream 886706 4028016 ~ 4087031 (-)
G115020 NA other upstream 1444752 4586062 ~ 4588297 (-)
AMCG00018220 NA other upstream 1504837 4646147 ~ 4651641 (-)
G115174 NA other upstream 2145076 5286386 ~ 5287873 (-)
G115183 NA other upstream 2158797 5300107 ~ 5304429 (-)

Expression


Co-expression Network