Gene
RNA
| Item | Value |
|---|---|
| gene id | G114731 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 3237043 ~ 3237244 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005886 | plasma membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU143685 | True | 202 | lncRNA | 0.42 | 1 | 3237043 | 3237244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018165 | NA | coding | upstream | 77014 | 3155022 ~ 3160029 (+) |
| AMCG00018164 | NA | coding | upstream | 97447 | 3124620 ~ 3139596 (+) |
| AMCG00018166 | NA | coding | upstream | 114868 | 3105020 ~ 3122175 (+) |
| AMCG00018159 | NA | coding | upstream | 241488 | 2976735 ~ 2995555 (+) |
| AMCG00018158 | prkar1b,LOC107653458,LOC107661853 | coding | upstream | 271724 | 2949891 ~ 2965319 (+) |
| AMCG00018173 | NA | coding | downstream | 402678 | 3639922 ~ 3663201 (+) |
| AMCG00018172 | LOC103021790,LOC108433116,LOC108256804,LOC107741797,LOC107574133 | coding | downstream | 443477 | 3680721 ~ 3681332 (+) |
| AMCG00018174 | NA | coding | downstream | 595333 | 3832577 ~ 3849146 (+) |
| AMCG00018175 | NA | coding | downstream | 631141 | 3868385 ~ 3877825 (+) |
| AMCG00018179 | pdpk1,LOC100380750 | coding | downstream | 663269 | 3900513 ~ 3910188 (+) |
| G114699 | NA | non-coding | upstream | 68061 | 3168163 ~ 3168982 (+) |
| G114674 | ubfd1 | non-coding | upstream | 133873 | 3102166 ~ 3103170 (+) |
| G114629 | NA | non-coding | upstream | 354075 | 2882432 ~ 2882968 (+) |
| G114624 | NA | non-coding | upstream | 369806 | 2864988 ~ 2867237 (+) |
| G114613 | NA | non-coding | upstream | 391590 | 2844305 ~ 2845453 (+) |
| G114806 | NA | non-coding | downstream | 778834 | 4016078 ~ 4018982 (+) |
| G114867 | NA | non-coding | downstream | 956098 | 4193342 ~ 4193996 (+) |
| G114868 | NA | non-coding | downstream | 957033 | 4194277 ~ 4198050 (+) |
| G114888 | NA | non-coding | downstream | 1061394 | 4298638 ~ 4301678 (+) |
| G114940 | NA | non-coding | downstream | 1148936 | 4386180 ~ 4386889 (+) |
| G114551 | NA | other | upstream | 589269 | 2640846 ~ 2647774 (+) |
| G114518 | NA | other | upstream | 668105 | 2491313 ~ 2568938 (+) |
| AMCG00018119 | tfap4,LOC107661646,LOC107718566,LOC107553667 | other | upstream | 970268 | 2247853 ~ 2266775 (+) |
| AMCG00018106 | NA | other | upstream | 1254477 | 1979046 ~ 1982566 (+) |
| G114330 | NA | other | upstream | 1258316 | 1977004 ~ 1978727 (+) |
| AMCG00018196 | NA | other | downstream | 949166 | 4186410 ~ 4193330 (+) |
| AMCG00018216 | telo2 | other | downstream | 1357689 | 4594933 ~ 4604105 (+) |
| G115049 | NA | other | downstream | 1524274 | 4761518 ~ 4763905 (+) |
| G115299 | NA | other | downstream | 2712219 | 5949463 ~ 5951017 (+) |
| AMCG00018272 | NA | other | downstream | 2918244 | 6155488 ~ 6160616 (+) |
