G114984


Basic Information

Item Value
gene id G114984
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4589295 ~ 4590074 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144005
CAGGGCTTCAGAGGGTGATGGAACGACGCGGCGCAGTAGATCGATGGAGAGTAGTTGTAGCCGTCGCTTCAGTGTCTGTGCTCTTGTCTCTTGTGCTACAATCTCGTTATCAACGTGGCTTTTATTCTAAGAACCAGGAGAGTTCAAACGGACCGTCCGAGGTCTTGTCCTTCAGCGTGCAGGTGGAGTGGCAGTGTGGGGACGGGCCACCCTAGTCAGACTGCCTCCGACGCCCTGTGCCAGCCCACGGTCCACCcgacacttttatttttgtgggggGGACCTGGTCTCCTATGAGCACAAAGCCCTCTCTCAGACCCGCCTTAGTGACAGCTTGGGTCGTGCTTGTGGAGCGATTTTCCACAGCCTGTATTTTGTTATGAAAATGGTAATAGtctaaatgtgtatatacatatttttctcccctccctctctctgaagAATAAGCCTTTTGTTCACAAACTTGCTTCCACGTCTCCAAAGATAGTCTCGCACTGCTGGGTGCTGCACTCACTTGCCAGttataaagcaaaatatatttaaaagatctattggggaaaaaaactcaCTTGGTAACTGAGGATTATATTGTAAACTGCAGTTAATTCTAATTGTGAAggatattgtattaattaaaagatCAGTATTGTTTACTGCTGTATGTTACTGTTCCCTTTGAAGAAATCCTGAAGATGTAATCATATTATTGTTTGAAGAATTATAGCCTTTCCAAGttactgtaaaaaaatgaaaagctacaCAGAATAAGATGATATTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144005 True 780 lncRNA 0.44 1 4589295 4590074

Neighbor

gene id symbol gene type direction distance location
AMCG00018212 NA coding upstream 4383 4569833 ~ 4584912 (+)
AMCG00018213 decr2,LOC107677236,LOC107667207 coding upstream 59956 4526000 ~ 4529339 (+)
AMCG00018214 NA coding upstream 64957 4518463 ~ 4524338 (+)
AMCG00018211 xpo6,LOC106600647 coding upstream 74207 4494443 ~ 4515088 (+)
AMCG00018204 LOC104948217 coding upstream 241335 4342934 ~ 4347960 (+)
AMCG00018215 tmem204 coding downstream 20768 4610842 ~ 4620287 (+)
AMCG00018218 NA coding downstream 39326 4629400 ~ 4639869 (+)
AMCG00018217 NA coding downstream 51084 4641158 ~ 4646266 (+)
AMCG00018225 NA coding downstream 142074 4732148 ~ 4737892 (+)
AMCG00018224 NA coding downstream 157236 4747310 ~ 4748167 (+)
G114940 NA non-coding upstream 202406 4386180 ~ 4386889 (+)
G114888 NA non-coding upstream 287617 4298638 ~ 4301678 (+)
G114868 NA non-coding upstream 391245 4194277 ~ 4198050 (+)
G114867 NA non-coding upstream 395299 4193342 ~ 4193996 (+)
G114806 NA non-coding upstream 570313 4016078 ~ 4018982 (+)
G114985 NA non-coding downstream 3386 4593460 ~ 4593845 (+)
G115061 NA non-coding downstream 223944 4814018 ~ 4814419 (+)
G115099 NA non-coding downstream 505074 5095148 ~ 5100938 (+)
G115188 NA non-coding downstream 726379 5316453 ~ 5317925 (+)
G115201 NA non-coding downstream 754413 5344487 ~ 5344947 (+)
AMCG00018196 NA other upstream 395965 4186410 ~ 4193330 (+)
G114551 NA other upstream 1941521 2640846 ~ 2647774 (+)
G114518 NA other upstream 2020357 2491313 ~ 2568938 (+)
AMCG00018119 tfap4,LOC107661646,LOC107718566,LOC107553667 other upstream 2322520 2247853 ~ 2266775 (+)
AMCG00018106 NA other upstream 2606729 1979046 ~ 1982566 (+)
AMCG00018216 telo2 other downstream 4859 4594933 ~ 4604105 (+)
G115049 NA other downstream 171444 4761518 ~ 4763905 (+)
G115299 NA other downstream 1359389 5949463 ~ 5951017 (+)
AMCG00018272 NA other downstream 1565414 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 2120408 6710482 ~ 6747438 (+)

Expression


Co-expression Network