G115020


Basic Information

Item Value
gene id G115020
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4586062 ~ 4588297 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144050
NNNGGGGATAAAAGAATGAAAAGGAAGTAAAAACAAACGCCAATGACAAAGGCCACTCAACTTGCTACCTGCAGAAGGTTTTGTCAAGGATTTGTTCTGTGAAGGAAAGGCGAGCTGGTCACGAACACCGTGGGCAGATCCAGTCATTGTGCCATGTGACAATAAATTAAGTAGTGCATTATTGGGTCTGTCTTAAATCTCTCGGCTCATACAGGGCAGGAATGGACACTGATCAAGCGACACCCCGCACCTGGGCAGCACAACCCAGACCCATTACTCTGGAGCGGAGGGCCAGGGGACGTCCCAGAAACCAAGCTGAAGAGGAGATGCGTCTCCTGGCTCTGGTGTGGGTTTAGCGGGTCTCGCTGCAAGGTGCTCAGATACTGGGCTAGGAAGCCAAGCGAACGGCGAGCAGAGGGGGCTTTCAGAGCGGGCTCCCTGGGggccccccacctcccccagaCGGCTCCTTCAAGTGCCACGGAGCAGACAAGCGGGCGGCTGAGGATTTCCTGCGTTTCCTCTTCACAGACATTACAGTGAGCAGAGGCAGAAATCAAAACCGGCGCAAACAAATTAAACGAAAATAAGTGAAAGTGGCAACAGCTAAGTAGTGCGTAAGACACTCACTCCGCACGGCAGCAGAGCACGGTGCTACCAGCTCACTGAAGAGGAGAAATAAAAAGCTATTTGGTGGAATAAACCGCTCCTCGGCACTGTCCTGTGACAGCTGGGAGGAGCTGTGCTTGTAGCACCTAAAACGAGCCACGAAAACGTCAGTTCCCTTCAGGATCCAGAATGCAAAGTATTTACAGACCAAACAGTGCTGGAGTGagtgtttcatatatatatatatatacacaaggtGAGATTAAGAGTCAGGTGAGCGGCTCCATGAACAGTCATTCTCCTCCGATCTATAAAAAATACTCAGGATCTacaagatagaaaaaaaaaaaaaaacttatacATGTACAGTAATTTACATCCAAGGCCatttgcaagaaaaacaaaacattaagaaGCGAGCGTTTGGGTGCAGGAGCGAGGCCGCTTCCTTATCcatgccccccctccccaagcACCTCAGAGATCCACGCCTCAGAGCTGGACAGTCCTGATGGCTCCAGTCACGGCACGCCCCCGGAAAGTGATATGTTGCTTTAAGGGAGTCTGACGGTCCTTCAGCGGAGATCACGCTTCCAGCTGGACAGTCCCACGGCCCTGCGACGGCTGGCCGGTCCTCTGAGAAGTCGCTCGCTCTCCCGCTCCAATCACAGTCCACAGCATCGTTCTGATGTCATCTCTAGTTATTGCTAAAGGTCATCCATGCAGTTTTTAAGTTATTTGCGTTTTCCTCAAGGTGCTGCTCTACTGAAGGTCGCTGTGAGTTTGCAGCCATCTAATGAAGTTGTTCCTGGAGTCGATTCCCGTGTGGAAGCTCTAGAACTTGCATTATTACACTAAATTGTTAAATGCGATCATATAAGCACTTTAAAGCAGTCGCTTATCTGCCACATGATcgattgaaattaaataaacttcaaACCACGTGATATTTGCTCGCTGCTCAGAAAAACGAGAGGAAACACACAAGCGGTGTATTGActgacaaagacaaagacattcTCAACCGGGAGGCGAGCGAGACGAATGGGCCGCCTTGCAACCGAGCCTCTTACCCGACTCGCATTCTGCATCTCCCCCTGGGAATCGTCCGGCCCGCGCCGCAAACAGCCACCCTTGTCGTGGAGTTTCTCTCGGACCGATCGGTGCCGTTACAAAACACAACGTGACAGACCCGGGCACGACCGCGATTACGGTGGTCCGGTGACGAGAGCATGGCACAACGGCACGGCTCAGAAGGGCGGTGCTTCCGTGAAACCTAATTTAAGCCGGCACTGGTCGACCTGGAGAAACCGCGGACACGTGCATCTGTTAGGGGTGGACCGGCACAGCCTCTCCGTTTAATTGTATATCTTTGAGGAGGCCGGATGGACAGACTCTTCCTGTACTTATAAACATACGACTGCCACCTCCTCCCCCAGTCAAACCCTGACATGCTTGTCCTCTACTCCGCAGCATTAAAGCCACATGCAAGAACCGCAGAGTTCAGGGCAGAGCTGCGTGGCTCCGGTGGTTCGCTCATGCCTCTTCAGAAGCCCGGCTCCAGAGATACACACTTGGGTCTGTTTCACATGGGCTTTTCCCTTTGCCGGTACCCCTCTCGCTGGAG

Function

NR:

description
PREDICTED: GSK-3-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144050 True 2236 TUCP 0.52 1 4586062 4588297

Neighbor

gene id symbol gene type direction distance location
AMCG00018210 sbk1,LOC107388055 coding downstream 125342 4457837 ~ 4460720 (-)
AMCG00018205 NA coding downstream 206015 4370469 ~ 4380047 (-)
AMCG00018208 NA coding downstream 226172 4350006 ~ 4359890 (-)
AMCG00018209 NA coding downstream 244577 4333059 ~ 4341485 (-)
AMCG00018207 LOC107677127 coding downstream 254887 4315262 ~ 4331175 (-)
AMCG00018223 NA coding upstream 16854 4605151 ~ 4610325 (-)
AMCG00018221 NA coding upstream 33973 4622270 ~ 4628633 (-)
AMCG00018219 NA coding upstream 51407 4639704 ~ 4640258 (-)
AMCG00018222 metrn coding upstream 77888 4666185 ~ 4672356 (-)
AMCG00018230 NA coding upstream 100518 4688815 ~ 4689879 (-)
G114941 NA non-coding downstream 199171 4385933 ~ 4386891 (-)
G114915 NA non-coding downstream 233699 4295311 ~ 4352363 (-)
G114785 NA non-coding downstream 675663 3908019 ~ 3910399 (-)
G114739 NA non-coding downstream 1184124 3400432 ~ 3401938 (-)
G114720 NA non-coding downstream 1444752 3140095 ~ 3141310 (-)
G115021 NA non-coding upstream 998 4589295 ~ 4590068 (-)
G115037 NA non-coding upstream 91243 4679540 ~ 4679749 (-)
G115071 NA non-coding upstream 232668 4820965 ~ 4821411 (-)
G115100 NA non-coding upstream 448434 5036731 ~ 5058586 (-)
G115144 NA non-coding upstream 564755 5153052 ~ 5203873 (-)
G114838 NA other downstream 499031 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 1938251 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 1976583 2609145 ~ 2609479 (-)
G114430 srl,LOC107553668,LOC107661647,LOC107718567,LOC107695714 other downstream 2297200 2281700 ~ 2288862 (-)
AMCG00018111 abca3,LOC102775623,LOC102307646,LOC107742093 other downstream 2518478 2006906 ~ 2067584 (-)
AMCG00018220 NA other upstream 57850 4646147 ~ 4651641 (-)
G115174 NA other upstream 698089 5286386 ~ 5287873 (-)
G115183 NA other upstream 711810 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 768549 5356846 ~ 5366754 (-)
G115320 NA other upstream 1362124 5950421 ~ 5951055 (-)

Expression


Co-expression Network