G115071



Basic Information


Item Value
gene id G115071
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 4820965 ~ 4821411 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU144111
CTGAGTAGCTTGATTATCCCCCTGGGTAGTGAAAATGAAACGGTCTgtgcaaaaataacaattaagaaTCATTAAGAGCTTATCAAGACATTTGACAAAAAGCTTTGTGTAAAATTCTTATATTGTGTTTGGAATAGTGTACGATGGCTTTTTTCCTTCAAATGACAGTATTACTCATCCCAAGTTTAagcagtgtattttaaatatctctTTAAAGTCTAATGTAGCAAATCATGGCTTTGGGCTTCCAAACATTATAGCACAGCGCAGTAATGTGACCATTCACTCGGCGTAAAAGCTGAACGCTTTGAAGTCATCTTTCATTTCCCGAAGACACGGGACTCTTCTAGACTGGTGCAAAGTGTGCGTTTCTTGCTTTTCGTATTTCGTATTCTCTGTACTTTCATCCCAGTTCATCCCATGCAATGCACAAGCTGTTGAACAATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU144111 True 447 lncRNA 0.38 1 4820965 4821411

Neighbor


gene id symbol gene type direction distance location
AMCG00018229 NA coding downstream 34483 4763728 ~ 4786482 (-)
AMCG00018228 NA coding downstream 59832 4746580 ~ 4761133 (-)
AMCG00018227 stub1,LOC106601937 coding downstream 76393 4736365 ~ 4744572 (-)
AMCG00018226 NA coding downstream 123063 4695362 ~ 4697902 (-)
AMCG00018230 NA coding downstream 131086 4688815 ~ 4689879 (-)
AMCG00018232 NA coding upstream 2414 4823825 ~ 4826013 (-)
AMCG00018239 NA coding upstream 328489 5149900 ~ 5155174 (-)
AMCG00018240 NA coding upstream 333961 5155372 ~ 5171519 (-)
AMCG00018246 nubp2,LOC102775692 coding upstream 384972 5206383 ~ 5212355 (-)
AMCG00018248 NA coding upstream 401476 5222887 ~ 5225675 (-)
G115037 NA non-coding downstream 141216 4679540 ~ 4679749 (-)
G115021 NA non-coding downstream 230897 4589295 ~ 4590068 (-)
G114941 NA non-coding downstream 434074 4385933 ~ 4386891 (-)
G114915 NA non-coding downstream 468602 4295311 ~ 4352363 (-)
G114785 NA non-coding downstream 910566 3908019 ~ 3910399 (-)
G115100 NA non-coding upstream 215320 5036731 ~ 5058586 (-)
G115144 NA non-coding upstream 331641 5153052 ~ 5203873 (-)
G115157 NA non-coding upstream 406569 5227980 ~ 5243187 (-)
G115160 NA non-coding upstream 410207 5231618 ~ 5233417 (-)
G115170 NA non-coding upstream 457675 5279086 ~ 5279296 (-)
AMCG00018220 NA other downstream 169324 4646147 ~ 4651641 (-)
G115020 NA other downstream 232668 4586062 ~ 4588297 (-)
G114838 NA other downstream 733934 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 2173154 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 2211486 2609145 ~ 2609479 (-)
G115174 NA other upstream 464975 5286386 ~ 5287873 (-)
G115183 NA other upstream 478696 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 535435 5356846 ~ 5366754 (-)
G115320 NA other upstream 1129010 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1789222 6610633 ~ 6652773 (-)

Expression



Co-expression Network