G115174


Basic Information

Item Value
gene id G115174
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5286386 ~ 5287873 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144242
GGCCAACTGATGTGTGAGGGCATTTCTCCCTgacctccaccccccaccctgtaCTTGCCCAGCTTTGGCTCCTGAAACAACATGCTACAGTGTGgcgtgtatacatacatacatacatgtgtgtgtgttacatatGTTGCACTCACTGGACCCCTCCACTGCTTGCACCCCAATccccactccactccactccgcAGGCACTGCCACTAAGCTCGGCCACCTCCCCCGGTCGGACCCGTCTCAGACTCggcctttttattttgaagggaCCGGCAGGTGAGTGGCCCAGGTGTCCAACCACAGGTACCCCCTCGACTCGCCCCATCATCACCCCGCTTACCTTTCCCCTTGGCCCCGCTGTGCCCATTCACGGCAGAGGCGAGGGACTCCTTCCTCAGGCGTTTGCTGGGCGGTCGGACGCTGGACCTGAGGAAGTGATGCTGGTCCTGGTTCTGGGGGTGCAGGTCCGGACCCggggcggaggaggaggaggaggcaggtACCGGTGCCGACCTGCATGGACCCGCAGATGATGGATGGAGATCTTCCTCCCCGTCTCTCTTTGTATTGCTCTCGTCGCTCCCCGGCTCTGCGCTCTCCTCTTCCTCGCCGCCTTCCAGCTTTCTGCCCGCTTTCTTCGCCCCTTCATCCCCGCTGCCGTCCCCGGGCTTCACTGTCATCCTGTCAACACATCAGCCAGGCACACCTTTCACATTTCCAGCAGAGCACCTCCATGCAATCAACTTAAAAAAGGCGAcaatctttttctctctcaacaTGGCCGCCGTTGTTTGTTTCAAATCCCCTTCCACCGTCCCGACAAAACAACCTGAAAACCCTCTCTCCGTGCAAGTGCAATGCCCGctaaaccccccaaaaaacacgGCAGGCCCTGATTGAGCCCGTCGTGTGAGTTTCCCCGCACTTCTAAGCCTCGTctacttttattttaaccaaCATCAATGCAAAGACAGACGCCTCCAGTTTAGCGCCCTGCAAAAAACCCAAACGACATTAATCTCTCGGCAACGCACAAGCTCTCGCTGGGATCGAGGCTCAAATAAAGTGGTTATTTGAAAAGGTGGGCTACCCATTTTGGTGGTCTTCGAGGGCGGACGGtatcttctttctcctcaccaTGGATCCGAGGTTTTTGGAGTAAAACAGCGGGTTAAATGGTGCATATTCAAGGCGAGATCAGGGCTTTGCCTGCGACGGTCTCCCTTCGCTCTCGCCTTTTCTCTGGGGCTGGAACTCGCCGCGGCTCCACTAGAAAACAGCTCCACTCTCTTCCCAAACTCGCTGCTCCGTCGGCTGATAACTTCGGATCAGAAAGCCCCCCGGACACCGAATAAAAACCACCTTGACCCCCACGGTTTCAGCTATCTATCCAGCCCGGGTGCAAGAAGGTGCGACCGGCCGGTTTCGTGCACTTTTACGCCGAAATGAAAGCTGCGCCGCTGCAACAGATCTTCCCCTCACTGTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144242 True 1488 TUCP 0.56 1 5286386 5287873

Neighbor

gene id symbol gene type direction distance location
AMCG00018245 NA coding downstream 2453 5279354 ~ 5283933 (-)
AMCG00018247 NA coding downstream 16981 5233620 ~ 5269405 (-)
AMCG00018248 NA coding downstream 60711 5222887 ~ 5225675 (-)
AMCG00018246 nubp2,LOC102775692 coding downstream 74031 5206383 ~ 5212355 (-)
AMCG00018240 NA coding downstream 114867 5155372 ~ 5171519 (-)
AMCG00018253 NA coding upstream 23284 5311157 ~ 5322315 (-)
AMCG00018252 dhrs7b coding upstream 44368 5332241 ~ 5342984 (-)
AMCG00018250 tmem11,LOC106600685 coding upstream 61765 5349638 ~ 5354923 (-)
AMCG00018258 NA coding upstream 320717 5608590 ~ 5612475 (-)
AMCG00018262 cops3 coding upstream 453156 5741029 ~ 5745704 (-)
G115173 NA non-coding downstream 870 5284945 ~ 5285516 (-)
G115172 NA non-coding downstream 2053 5284074 ~ 5284333 (-)
G115170 NA non-coding downstream 7090 5279086 ~ 5279296 (-)
G115157 NA non-coding downstream 43199 5227980 ~ 5243187 (-)
G115160 NA non-coding downstream 52969 5231618 ~ 5233417 (-)
G115176 NA non-coding upstream 4150 5292023 ~ 5292259 (-)
G115177 NA non-coding upstream 5806 5293679 ~ 5293933 (-)
G115179 NA non-coding upstream 9041 5296914 ~ 5297182 (-)
G115180 NA non-coding upstream 9559 5297432 ~ 5298505 (-)
G115181 NA non-coding upstream 10768 5298641 ~ 5298857 (-)
AMCG00018220 NA other downstream 634745 4646147 ~ 4651641 (-)
G115020 NA other downstream 698089 4586062 ~ 4588297 (-)
G114838 NA other downstream 1199355 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 2638575 2636501 ~ 2647811 (-)
G114549 LOC104962440 other downstream 2676907 2609145 ~ 2609479 (-)
G115183 NA other upstream 12234 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 68973 5356846 ~ 5366754 (-)
G115320 NA other upstream 662548 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1322760 6610633 ~ 6652773 (-)
G115581 NA other upstream 2455345 7743218 ~ 7773892 (-)

Expression


Co-expression Network