G115177


Basic Information

Item Value
gene id G115177
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5293679 ~ 5293933 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144245
TCAGGCGTGGGTTGTGTGCCAGGCTCTGCACCCGTGCCCAGGAATGGTTACTGCGGGGCTGCAGCTCCACGGGCACCTTCAGGGGCAGCCGGACCGGTTTCTGGTCCTCCTCGTCACTGACCCCTAGAGGGGAgggggcacagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagag

Function

GO:

id name namespace
GO:0051962 positive regulation of nervous system development biological_process
GO:0051963 regulation of synapse assembly biological_process
GO:0044089 positive regulation of cellular component biogenesis biological_process
GO:0051965 positive regulation of synapse assembly biological_process
GO:0050803 regulation of synapse structure or activity biological_process
GO:0050807 regulation of synapse organization biological_process
GO:0050808 synapse organization biological_process
GO:0007416 synapse assembly biological_process

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
TU144245 True 255 lncRNA 0.60 1 5293679 5293933

Neighbor

gene id symbol gene type direction distance location
AMCG00018245 NA coding downstream 9746 5279354 ~ 5283933 (-)
AMCG00018247 NA coding downstream 24274 5233620 ~ 5269405 (-)
AMCG00018248 NA coding downstream 68004 5222887 ~ 5225675 (-)
AMCG00018246 nubp2,LOC102775692 coding downstream 81324 5206383 ~ 5212355 (-)
AMCG00018240 NA coding downstream 122160 5155372 ~ 5171519 (-)
AMCG00018253 NA coding upstream 17224 5311157 ~ 5322315 (-)
AMCG00018252 dhrs7b coding upstream 38308 5332241 ~ 5342984 (-)
AMCG00018250 tmem11,LOC106600685 coding upstream 55705 5349638 ~ 5354923 (-)
AMCG00018258 NA coding upstream 314657 5608590 ~ 5612475 (-)
AMCG00018262 cops3 coding upstream 447096 5741029 ~ 5745704 (-)
G115176 NA non-coding downstream 1420 5292023 ~ 5292259 (-)
G115173 NA non-coding downstream 8163 5284945 ~ 5285516 (-)
G115172 NA non-coding downstream 9346 5284074 ~ 5284333 (-)
G115170 NA non-coding downstream 14383 5279086 ~ 5279296 (-)
G115157 NA non-coding downstream 50492 5227980 ~ 5243187 (-)
G115179 NA non-coding upstream 2981 5296914 ~ 5297182 (-)
G115180 NA non-coding upstream 3499 5297432 ~ 5298505 (-)
G115181 NA non-coding upstream 4708 5298641 ~ 5298857 (-)
G115182 NA non-coding upstream 5081 5299014 ~ 5299503 (-)
G115202 NA non-coding upstream 50554 5344487 ~ 5345134 (-)
G115174 NA other downstream 5806 5286386 ~ 5287873 (-)
AMCG00018220 NA other downstream 642038 4646147 ~ 4651641 (-)
G115020 NA other downstream 705382 4586062 ~ 4588297 (-)
G114838 NA other downstream 1206648 4028016 ~ 4087031 (-)
AMCG00018142 NA other downstream 2645868 2636501 ~ 2647811 (-)
G115183 NA other upstream 6174 5300107 ~ 5304429 (-)
AMCG00018251 natd1,LOC107745813 other upstream 62913 5356846 ~ 5366754 (-)
G115320 NA other upstream 656488 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1316700 6610633 ~ 6652773 (-)
G115581 NA other upstream 2449285 7743218 ~ 7773892 (-)

Expression


Co-expression Network