G115202


Basic Information

Item Value
gene id G115202
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5344487 ~ 5345134 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144282
GACATAATACCGTAAACTGTgtgtattaaacatattaatatcATCTGCACCTTCTGGTGGCTCCATGTGGTTCTCACGTTTCTCCTCATGCATCTAATTAGCCTCTATTTGACTCTCTTTGAGACTGCTTTGCGATTTGAAATACCAGAGAGAATGTGCTGATGTTTCTAATCtgaatgaaaggaaatgtgACACAACCGCATGGGAAGCACCTGGAGTTTAGTGTTGCTAAATTGCTTTATTTGCACAGGGAAGTTTTTCTGTACAGAATCACGAGACCACATTCAATGCATCACTTGGTTCAACAGCTAAAACAATCATTTTCCCCACCCAAAATGTAAACCATACCTTGTTTGACTTTGTGATGTGATCCAGACACTTTTCAATCTCATTTCCTTTTCATATggttaaacatacattttctgcaaaggCATTTAATAAACTTTTCCCATTACTCTCTCTATCTTGGACTCTACGTGTATCTCCCTGCAACGCCTCTCCCCCCAATAAACAAGTACAACTGGAGCCACGAGCCGTTACGTTACCCTAGCTGTTGCCACATTCTGCTTCGAGTCTGAAGAAGTAGTAGACGAGTGATTTCAAAGGGTTTGAAACCGGGCAGCTTCCTCGCACCGTTGGCAGAGCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144282 True 648 lncRNA 0.42 1 5344487 5345134

Neighbor

gene id symbol gene type direction distance location
AMCG00018252 dhrs7b coding downstream 1503 5332241 ~ 5342984 (-)
AMCG00018253 NA coding downstream 22172 5311157 ~ 5322315 (-)
AMCG00018245 NA coding downstream 60554 5279354 ~ 5283933 (-)
AMCG00018247 NA coding downstream 75082 5233620 ~ 5269405 (-)
AMCG00018248 NA coding downstream 118812 5222887 ~ 5225675 (-)
AMCG00018250 tmem11,LOC106600685 coding upstream 4504 5349638 ~ 5354923 (-)
AMCG00018258 NA coding upstream 263456 5608590 ~ 5612475 (-)
AMCG00018262 cops3 coding upstream 395895 5741029 ~ 5745704 (-)
AMCG00018264 rasd1,LOC107653935,LOC107720458 coding upstream 437942 5783076 ~ 5784900 (-)
AMCG00018265 NA coding upstream 449383 5794517 ~ 5808843 (-)
G115182 NA non-coding downstream 44984 5299014 ~ 5299503 (-)
G115181 NA non-coding downstream 45630 5298641 ~ 5298857 (-)
G115180 NA non-coding downstream 45982 5297432 ~ 5298505 (-)
G115179 NA non-coding downstream 47305 5296914 ~ 5297182 (-)
G115177 NA non-coding downstream 50554 5293679 ~ 5293933 (-)
G115219 NA non-coding upstream 628 5345762 ~ 5349630 (-)
G115243 NA non-coding upstream 262699 5607833 ~ 5608069 (-)
G115277 NA non-coding upstream 402324 5747458 ~ 5748359 (-)
G115278 NA non-coding upstream 404649 5749783 ~ 5750043 (-)
G115279 NA non-coding upstream 404958 5750092 ~ 5754022 (-)
G115183 NA other downstream 40058 5300107 ~ 5304429 (-)
G115174 NA other downstream 56614 5286386 ~ 5287873 (-)
AMCG00018220 NA other downstream 692846 4646147 ~ 4651641 (-)
G115020 NA other downstream 756190 4586062 ~ 4588297 (-)
G114838 NA other downstream 1257456 4028016 ~ 4087031 (-)
AMCG00018251 natd1,LOC107745813 other upstream 11712 5356846 ~ 5366754 (-)
G115320 NA other upstream 605287 5950421 ~ 5951055 (-)
AMCG00018291 NA other upstream 1265499 6610633 ~ 6652773 (-)
G115581 NA other upstream 2398084 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 3296762 8641896 ~ 8648807 (-)

Expression


Co-expression Network