G115299


Basic Information

Item Value
gene id G115299
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 5949463 ~ 5951017 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144414
gctttttatcaATTCCAAGCATTGgtattcaaatacattcagTCAATATTAACCCCTCAACCCTTGTCATAGGTTTCCCTTCATGTACCATCTACttgataattataattagtGTTGGAAATATGCATGCTGTGCAGAGAAAGGCAAGGAAAGGGACCACGACTTGTACAAACTAATTTGTTACATGTgaaaaaatttgaaaaaaagttttgaaataaaataactgttatGAATGTTGTCCTACACAAGAACATGGCAGCAAGCAGAGTAATGGAAAAGAACAGCCTAATGGTACAAGATGAAAAGGCAATATACTTAATGAATACtttatgaatgtttttactggggaagagaaaacataacattttgcaaATTGAAGAGGTTTTTACTGCCCTCAGTAGGAATATGCGAGACCTCGCTCATGTGCATTGGGGGATTTGTGTTGCTTCTTTCCTGATGTGTTTCCTCATTTAGCTCCTATCAGAGAAAGAACTGGATTGTCTTGAATTTTCCTCCTGCCCAGGTGTATCCAGCTGCTGCTTCCTTTCGGCTCCTCTTTTCCTCTTGAGATCACCTCAGATGTAAAACCATCCTCTCCCAGCACACGTACCCAGCAGATATTCAGTCTGATGACCCTATTTGCATATGTTCCTGCTGTCTGCAAAATCATCTCACAGCACATTGAGCTAACCTAACACTGACCTGGAATCCATTTGTCTTTGTGCTACTTTGCGCTATATTCACCGGTCTCCCATGAATTGATTACCACTGTGCTCAATGCAGGATTCCCGCAGAAGACTTTAGTGGCTTCCTCAGATTATTTCAGTCATGGCAATGGTGTCATTTCAGTCCTGTATTGAAAGAGTGACACTGTCTAACACACCACAAAGCCATGGAGCAAGATCACGCCCCAGCACTGGTCTTGGCCACAGCAAGAAGCTTCACACCCGAGACCAACCGGCCCTGAAAGATGCCATACCTTCTCTGGGTAGTTTGACCCTTGGGAGGCAGGTGGACAACGAGAGCATGAGGATACGTGATGTGGATTCAGTCACACCAGCATCCCAGGCTTGGGCTGCTAGGCCAGACCACTGTCTGTGGGTAACCGGCTGCAGACTCGGGAACATTTTGCTTTGCGGTTGAAGGACTGTGCCAGCAGTGAAGAGCATGTCAAGAACGCTCAGAAGCTGCTCTGAACACACGAGAGCAGAACAACCGCTGTTCCTGCTCCTCCTACACAAGCTGCACTCCTCCAGCGCGCCAACGACAATGGGCATCACCGGGCACAGACCCTGCAGTCTGGTTCTCTTCCAGGATctgtattatcatcatcaaaaGCAACGACCATTTGAGTTTGGTATTTGAATAGCAAGCATTTCTCTGAAACCTGCAACAGCTAATGGCTGCCTGCTGGCTCTGCACTGTGAGACTTTTTTAGTCCTCTGtcacactttttgtttgtactGTTGTATACGatttgtcatttgtgttttcCTATATGACAGTTTGTTGTCCAGTATGATATTTGTTGGCTGTCCTGTACCACaaactgtct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144414 True 1555 TUCP 0.44 1 5949463 5951017

Neighbor

gene id symbol gene type direction distance location
AMCG00018267 NA coding upstream 871 5935039 ~ 5948592 (+)
AMCG00018266 NA coding upstream 44976 5890174 ~ 5904487 (+)
AMCG00018260 med9 coding upstream 171472 5777776 ~ 5777991 (+)
AMCG00018261 NA coding upstream 199041 5748069 ~ 5750422 (+)
AMCG00018259 NA coding upstream 210639 5688305 ~ 5738824 (+)
AMCG00018268 NA coding downstream 1252 5952269 ~ 5963749 (+)
AMCG00018271 NA coding downstream 20797 5971814 ~ 6015227 (+)
AMCG00018270 LOC100707100,LOC102798624,LOC101484267,LOC106579017,LOC107726261 coding downstream 85063 6036080 ~ 6040179 (+)
AMCG00018269 NA coding downstream 109944 6060961 ~ 6061581 (+)
AMCG00018273 dexi,LOC107690264,LOC107567922,LOC107733843,LOC107590611,LOC107736577,LOC107685935 coding downstream 174483 6125500 ~ 6125769 (+)
G115201 NA non-coding upstream 604516 5344487 ~ 5344947 (+)
G115188 NA non-coding upstream 631538 5316453 ~ 5317925 (+)
G115099 NA non-coding upstream 848525 5095148 ~ 5100938 (+)
G115061 NA non-coding upstream 1135044 4814018 ~ 4814419 (+)
G114985 NA non-coding upstream 1355618 4593460 ~ 4593845 (+)
G115331 LOC100136012 non-coding downstream 95013 6046030 ~ 6046534 (+)
G115379 c2h16orf72,LOC105900007,LOC107685917,LOC107590581 non-coding downstream 574702 6525719 ~ 6588409 (+)
G115419 NA non-coding downstream 667161 6618178 ~ 6620097 (+)
G115439 NA non-coding downstream 703105 6654122 ~ 6678353 (+)
G115441 arhgdib,LOC106606251,LOC107685923,LOC107590585 non-coding downstream 707516 6658533 ~ 6667223 (+)
G115049 NA other upstream 1185558 4761518 ~ 4763905 (+)
AMCG00018216 telo2 other upstream 1345358 4594933 ~ 4604105 (+)
AMCG00018196 NA other upstream 1756133 4186410 ~ 4193330 (+)
G114551 NA other upstream 3301689 2640846 ~ 2647774 (+)
G114518 NA other upstream 3380525 2491313 ~ 2568938 (+)
AMCG00018272 NA other downstream 204471 6155488 ~ 6160616 (+)
AMCG00018280 NA other downstream 759465 6710482 ~ 6747438 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other downstream 1942610 7893627 ~ 7894449 (+)
G115648 NA other downstream 2168761 8119778 ~ 8122171 (+)
G115789 NA other downstream 2742347 8693364 ~ 8694719 (+)

Expression


Co-expression Network