Gene
RNA
| Item | Value |
|---|---|
| gene id | G115332 |
| gene name | LOC100136012 |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 6046030 ~ 6046618 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU144448 | True | 589 | lncRNA | 0.43 | 1 | 6046030 | 6046618 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018263 | NA | coding | downstream | 160030 | 5881546 ~ 5886000 (-) |
| AMCG00018265 | NA | coding | downstream | 237187 | 5794517 ~ 5808843 (-) |
| AMCG00018264 | rasd1,LOC107653935,LOC107720458 | coding | downstream | 261130 | 5783076 ~ 5784900 (-) |
| AMCG00018262 | cops3 | coding | downstream | 300326 | 5741029 ~ 5745704 (-) |
| AMCG00018258 | NA | coding | downstream | 433555 | 5608590 ~ 5612475 (-) |
| AMCG00018274 | clec16a | coding | upstream | 21685 | 6068303 ~ 6124832 (-) |
| AMCG00018289 | NA | coding | upstream | 82095 | 6128713 ~ 6155791 (-) |
| AMCG00018292 | nubp1,LOC107690260,LOC107590599 | coding | upstream | 111662 | 6158280 ~ 6182812 (-) |
| AMCG00018286 | NA | coding | upstream | 173355 | 6219973 ~ 6231007 (-) |
| AMCG00018293 | grin2a,LOC107685916,LOC107690256,LOC107568390 | coding | upstream | 262751 | 6309369 ~ 6464857 (-) |
| G115279 | NA | non-coding | downstream | 292008 | 5750092 ~ 5754022 (-) |
| G115278 | NA | non-coding | downstream | 295987 | 5749783 ~ 5750043 (-) |
| G115277 | NA | non-coding | downstream | 297671 | 5747458 ~ 5748359 (-) |
| G115243 | NA | non-coding | downstream | 437961 | 5607833 ~ 5608069 (-) |
| G115219 | NA | non-coding | downstream | 696400 | 5345762 ~ 5349630 (-) |
| G115395 | NA | non-coding | upstream | 170910 | 6217528 ~ 6219216 (-) |
| G115534 | NA | non-coding | upstream | 955184 | 7001802 ~ 7002005 (-) |
| G115577 | NA | non-coding | upstream | 1687479 | 7734097 ~ 7734384 (-) |
| G115579 | NA | non-coding | upstream | 1695356 | 7741974 ~ 7742210 (-) |
| G115580 | NA | non-coding | upstream | 1695923 | 7742541 ~ 7742747 (-) |
| G115320 | NA | other | downstream | 94975 | 5950421 ~ 5951055 (-) |
| AMCG00018251 | natd1,LOC107745813 | other | downstream | 679276 | 5356846 ~ 5366754 (-) |
| G115183 | NA | other | downstream | 741601 | 5300107 ~ 5304429 (-) |
| G115174 | NA | other | downstream | 758157 | 5286386 ~ 5287873 (-) |
| AMCG00018220 | NA | other | downstream | 1394389 | 4646147 ~ 4651641 (-) |
| AMCG00018291 | NA | other | upstream | 564015 | 6610633 ~ 6652773 (-) |
| G115581 | NA | other | upstream | 1696600 | 7743218 ~ 7773892 (-) |
| AMCG00018344 | NA | other | upstream | 2595278 | 8641896 ~ 8648807 (-) |
| AMCG00018339 | NA | other | upstream | 2620119 | 8666737 ~ 8676808 (-) |
| AMCG00018364 | ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 | other | upstream | 3193194 | 9239812 ~ 9258202 (-) |
