G115534


Basic Information

Item Value
gene id G115534
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 7001802 ~ 7002005 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144711
agtgatccaaggatcctatccagtctgtttttgaatgttcccaaattgtctcttcagccacatcgctggggagtttgttcagattgtgatgcctttctgtgtgaagaagtgtctcctgttttccgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgccgatctggaaaagctcctctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144711 True 204 lncRNA 0.49 1 7001802 7002005

Neighbor

gene id symbol gene type direction distance location
AMCG00018304 NA coding downstream 125624 6866912 ~ 6876178 (-)
AMCG00018301 NA coding downstream 151008 6827619 ~ 6850794 (-)
AMCG00018299 NA coding downstream 175579 6821595 ~ 6826223 (-)
AMCG00018298 NA coding downstream 218219 6780771 ~ 6783583 (-)
AMCG00018290 NA coding downstream 224364 6776337 ~ 6777438 (-)
AMCG00018302 LOC107568067,LOC107685930,LOC107733849 coding upstream 131893 7133898 ~ 7136847 (-)
AMCG00018303 rbfox1,LOC107568067 coding upstream 151086 7153091 ~ 7160634 (-)
AMCG00018307 NA coding upstream 719259 7721264 ~ 7743678 (-)
AMCG00018306 NA coding upstream 743091 7745096 ~ 7763759 (-)
AMCG00018310 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107568127,LOC107690242,LOC107733860 coding upstream 881202 7883207 ~ 7894569 (-)
G115395 NA non-coding downstream 782586 6217528 ~ 6219216 (-)
G115332 LOC100136012 non-coding downstream 955184 6046030 ~ 6046618 (-)
G115279 NA non-coding downstream 1247780 5750092 ~ 5754022 (-)
G115278 NA non-coding downstream 1251759 5749783 ~ 5750043 (-)
G115277 NA non-coding downstream 1253443 5747458 ~ 5748359 (-)
G115577 NA non-coding upstream 732092 7734097 ~ 7734384 (-)
G115579 NA non-coding upstream 739969 7741974 ~ 7742210 (-)
G115580 NA non-coding upstream 740536 7742541 ~ 7742747 (-)
G115596 NA non-coding upstream 840332 7842337 ~ 7842708 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding upstream 858311 7860316 ~ 7868626 (-)
AMCG00018291 NA other downstream 349029 6610633 ~ 6652773 (-)
G115320 NA other downstream 1050747 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 1635048 5356846 ~ 5366754 (-)
G115183 NA other downstream 1697373 5300107 ~ 5304429 (-)
G115174 NA other downstream 1713929 5286386 ~ 5287873 (-)
G115581 NA other upstream 741213 7743218 ~ 7773892 (-)
AMCG00018344 NA other upstream 1639891 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 1664732 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 2237807 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 2772301 9774306 ~ 9779545 (-)

Expression


Co-expression Network