G115591


Basic Information

Item Value
gene id G115591
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 7897940 ~ 7898180 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144782
TCCTGCTTGATTCCGGTGTGTTTTGAGGATGTATCTTTATCTCCTATCTTTGGATCGATTCGCAATCGCCATGTTATTAGCATCCATCGCGAGTCGCAGGAGGGGTGCTTATTTAGTATGTGTCATCCGACGGCAGCCACTGAAACCAAGCATAACgaaatacaaattgaataaaAGGACCTAACCGGTGCATAGGAGGGATAGAGCAGCAGAGGCTCCTGATTCCGGCAGCTAGAATCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144782 True 241 lncRNA 0.47 1 7897940 7898180

Neighbor

gene id symbol gene type direction distance location
AMCG00018309 sept12,LOC107568113,LOC107733855,LOC107690244 coding upstream 19747 7845467 ~ 7878193 (+)
AMCG00018308 NA coding upstream 83149 7804239 ~ 7814791 (+)
AMCG00018305 NA coding upstream 151456 7737626 ~ 7746484 (+)
AMCG00018300 NA coding upstream 998272 6883935 ~ 6899668 (+)
AMCG00018294 NA coding upstream 1069200 6827691 ~ 6828740 (+)
AMCG00018312 flr,LOC107733869,LOC107738612,LOC107568167,LOC107680859,LOC105900006 coding downstream 152230 8050410 ~ 8074161 (+)
AMCG00018313 NA coding downstream 176498 8074678 ~ 8078774 (+)
AMCG00018319 LOC107568381,LOC106511642,LOC104967806 coding downstream 184792 8082972 ~ 8089974 (+)
AMCG00018317 rab40c,LOC107685905,LOC107590575,LOC107567894,LOC107690266 coding downstream 199208 8097388 ~ 8114190 (+)
AMCG00018318 NA coding downstream 217889 8116069 ~ 8118432 (+)
G115585 NA non-coding upstream 7039 7883205 ~ 7890901 (+)
G115560 NA non-coding upstream 176976 7720607 ~ 7720964 (+)
G115535 NA non-coding upstream 810974 7085574 ~ 7086966 (+)
G115514 NA non-coding upstream 1059079 6837706 ~ 6838861 (+)
G115511 NA non-coding upstream 1064628 6829088 ~ 6833312 (+)
G115640 NA non-coding downstream 196020 8094200 ~ 8094449 (+)
G115679 NA non-coding downstream 396236 8294416 ~ 8347836 (+)
G115678 NA non-coding downstream 453897 8352077 ~ 8372827 (+)
G115796 NA non-coding downstream 804977 8703157 ~ 8704903 (+)
G115873 NA non-coding downstream 963901 8862081 ~ 8862511 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 3491 7893627 ~ 7894449 (+)
AMCG00018280 NA other upstream 1150502 6710482 ~ 6747438 (+)
AMCG00018272 NA other upstream 1737324 6155488 ~ 6160616 (+)
G115299 NA other upstream 1946923 5949463 ~ 5951017 (+)
G115049 NA other upstream 3134035 4761518 ~ 4763905 (+)
G115648 NA other downstream 221598 8119778 ~ 8122171 (+)
G115789 NA other downstream 795184 8693364 ~ 8694719 (+)
AMCG00018358 polr3k,rpc11 other downstream 1301477 9199657 ~ 9206776 (+)
AMCG00018360 f100a other downstream 1341631 9239811 ~ 9245234 (+)
AMCG00018368 NA other downstream 1541477 9439657 ~ 9447144 (+)

Expression


Co-expression Network