G115596


Basic Information

Item Value
gene id G115596
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 7842337 ~ 7842708 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU144788
GGCAGAGCTACAGCCTACCTTCTCTCATTCACGGACTGTCTACGCTGCAGCCGAATCCAGTGGTAATCCAATGAGTCTCCTGCCACCCGAGGGACAAGCCACTTCTTCTCggttttagaaatgttttccctgcttatttttttccctcagccTGACTTTCCTGTCCTGTAGAAGCAATAACTTAGTGAACAGAGTGactgagctctctctctctctctctctcttcccctcccgTATGTGTCTCAGTGTGAGAGAGCGAGGGCAACGGCACAAACTGCACACACTCATTCACATGCAGATTGGCAAGAAGCTTCCACTAATCCAGAGGAGTAGCCTGAtccaacctcc

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU144788 True 348 lncRNA 0.50 2 7842337 7842708

Neighbor

gene id symbol gene type direction distance location
AMCG00018306 NA coding downstream 78578 7745096 ~ 7763759 (-)
AMCG00018307 NA coding downstream 98659 7721264 ~ 7743678 (-)
AMCG00018303 rbfox1,LOC107568067 coding downstream 681703 7153091 ~ 7160634 (-)
AMCG00018302 LOC107568067,LOC107685930,LOC107733849 coding downstream 705490 7133898 ~ 7136847 (-)
AMCG00018304 NA coding downstream 966159 6866912 ~ 6876178 (-)
AMCG00018310 fbxl16,LOC107568165,LOC107685932,LOC107738613,LOC107568127,LOC107690242,LOC107733860 coding upstream 40499 7883207 ~ 7894569 (-)
AMCG00018311 gsg1l,LOC107738642,LOC107690243,LOC107685933,LOC103366699 coding upstream 101409 7944117 ~ 7972869 (-)
AMCG00018314 NA coding upstream 197802 8040510 ~ 8045893 (-)
AMCG00018315 NA coding upstream 225493 8068201 ~ 8073947 (-)
AMCG00018316 NA coding upstream 236527 8079235 ~ 8081255 (-)
G115580 NA non-coding downstream 99590 7742541 ~ 7742747 (-)
G115579 NA non-coding downstream 100127 7741974 ~ 7742210 (-)
G115577 NA non-coding downstream 107953 7734097 ~ 7734384 (-)
G115534 NA non-coding downstream 840332 7001802 ~ 7002005 (-)
G115395 NA non-coding downstream 1623121 6217528 ~ 6219216 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding upstream 17608 7860316 ~ 7868626 (-)
G115732 NA non-coding upstream 587418 8430126 ~ 8433570 (-)
G115807 NA non-coding upstream 674626 8517334 ~ 8519203 (-)
G115874 NA non-coding upstream 1019165 8861873 ~ 8862377 (-)
G115949 NA non-coding upstream 1358092 9200800 ~ 9215817 (-)
G115581 NA other downstream 68445 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 1189564 6610633 ~ 6652773 (-)
G115320 NA other downstream 1891282 5950421 ~ 5951055 (-)
AMCG00018251 natd1,LOC107745813 other downstream 2475583 5356846 ~ 5366754 (-)
G115183 NA other downstream 2537908 5300107 ~ 5304429 (-)
AMCG00018344 NA other upstream 799188 8641896 ~ 8648807 (-)
AMCG00018339 NA other upstream 824029 8666737 ~ 8676808 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 1397104 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 1931598 9774306 ~ 9779545 (-)
G116165 NA other upstream 2076338 9919046 ~ 9924582 (-)

Expression


Co-expression Network