G115874


Basic Information

Item Value
gene id G115874
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 8861873 ~ 8862377 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145110
agaactctgcggctcatctggtattctctctgccacgatttacacgctactccactgctccgctccctccactggctcctgatagtggcacgcattcagttcaagactttgaccctcacctaccgctgtcttgaccacactgcaccaagctaccttcagtcactcgtctctccatacatcccctccagaccactgcgctcctccagtgccagaagactaactctgcctcctctccactctccttcctccagagccgctccttctcatccctggcccctaaatggtggaacgacctgcccaccgaagtcaaaacaacagagtccttgacctcattccagcgcttactcaagacgcctCTTTTCCGacagtcctctatccctgctagataacacttcacagtttttattatgcttctcgcgttcttgattgttttcctccttgctccctttcccgtagcccttgtctgtgaccctacatcttgacagcacttagctttcactgtcca

Function

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP5-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145110 True 505 lncRNA 0.52 1 8861873 8862377

Neighbor

gene id symbol gene type direction distance location
AMCG00018346 LOC104930119,LOC101486217,LOC102210124,LOC108246886,LOC106529451,LOC100701961 coding downstream 144471 8700411 ~ 8717402 (-)
AMCG00018347 NA coding downstream 162940 8693359 ~ 8698933 (-)
AMCG00018340 LOC108274424 coding downstream 173643 8687709 ~ 8688230 (-)
AMCG00018342 NA coding downstream 177225 8677864 ~ 8684648 (-)
AMCG00018341 clg6h16orf45,LOC101485480,LOC102775719,LOC108236367,LOC103355942 coding downstream 230285 8625877 ~ 8631588 (-)
AMCG00018352 NA coding upstream 47370 8909747 ~ 8916027 (-)
AMCG00018362 NA coding upstream 328387 9190764 ~ 9192941 (-)
AMCG00018363 snrnp25,cp033,LOC106601091,LOC101481050,LOC107703331 coding upstream 331661 9194038 ~ 9199468 (-)
AMCG00018361 cdip1,LOC100712532,LOC103374307 coding upstream 345160 9207537 ~ 9217538 (-)
AMCG00018367 NA coding upstream 497923 9360300 ~ 9380160 (-)
G115807 NA non-coding downstream 342670 8517334 ~ 8519203 (-)
G115732 NA non-coding downstream 428303 8430126 ~ 8433570 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 993247 7860316 ~ 7868626 (-)
G115596 NA non-coding downstream 1019165 7842337 ~ 7842708 (-)
G115580 NA non-coding downstream 1119126 7742541 ~ 7742747 (-)
G115949 NA non-coding upstream 338423 9200800 ~ 9215817 (-)
G116058 NA non-coding upstream 618533 9480910 ~ 9482152 (-)
G116065 NA non-coding upstream 665115 9527492 ~ 9527736 (-)
G116136 NA non-coding upstream 922053 9784430 ~ 9788579 (-)
G116236 NA non-coding upstream 1281048 10143425 ~ 10144599 (-)
AMCG00018339 NA other downstream 185065 8666737 ~ 8676808 (-)
AMCG00018344 NA other downstream 213066 8641896 ~ 8648807 (-)
G115581 NA other downstream 1087981 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 2209100 6610633 ~ 6652773 (-)
G115320 NA other downstream 2910818 5950421 ~ 5951055 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other upstream 377435 9239812 ~ 9258202 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 911929 9774306 ~ 9779545 (-)
G116165 NA other upstream 1056669 9919046 ~ 9924582 (-)
AMCG00018416 usp42 other upstream 1258222 10120599 ~ 10136769 (-)
AMCG00018424 tecpr1,LOC102784946,LOC103372311 other upstream 1440677 10303054 ~ 10332982 (-)

Expression


Co-expression Network