G115990


Basic Information

Item Value
gene id G115990
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9437032 ~ 9437303 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145254
GGCGGTTTCCACACTGGCCTCGGCTTCAAAAGCTGCTTTACTGTTCCCTCTTCGTCCGGTGGAGAGCAGCGGCGCGTAAAGACGCACCGGCCGGGCGCGGAGGAGATGCGGCACCGGGACAGTGACGTCTCCGCTGCTGACACACAGGACTTCCCAGCGTCAAAGCGCGCAGCCTGGCTGGGTTCGGGTAGAGCAGACACCAGTAACCAGGTTATCTAAATGCAGGCGTTTTAGATGGGCTacatatgtatttcaaaaaaagtgcattttat

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145254 True 272 lncRNA 0.56 1 9437032 9437303

Neighbor

gene id symbol gene type direction distance location
AMCG00018365 aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 coding upstream 77346 9354703 ~ 9359686 (+)
AMCG00018366 NA coding upstream 141127 9291332 ~ 9295905 (+)
AMCG00018359 mgrn1 coding upstream 151614 9259454 ~ 9285418 (+)
AMCG00018355 NA coding upstream 249273 9162486 ~ 9187759 (+)
AMCG00018357 NA coding upstream 280579 9156181 ~ 9156453 (+)
AMCG00018373 NA coding downstream 82364 9519667 ~ 9520987 (+)
AMCG00018371 NA coding downstream 108238 9545541 ~ 9561135 (+)
AMCG00018383 NA coding downstream 238385 9675688 ~ 9685520 (+)
AMCG00018395 NA coding downstream 253523 9690826 ~ 9691578 (+)
AMCG00018385 NA coding downstream 271676 9708979 ~ 9711300 (+)
G115939 NA non-coding upstream 206891 9228010 ~ 9230141 (+)
G115931 NA non-coding upstream 237592 9198877 ~ 9199440 (+)
G115896 NA non-coding upstream 400449 9036330 ~ 9036583 (+)
G115875 NA non-coding upstream 566690 8868542 ~ 8870342 (+)
G115873 NA non-coding upstream 574521 8862081 ~ 8862511 (+)
G116002 NA non-coding downstream 35194 9472497 ~ 9477108 (+)
G116011 NA non-coding downstream 90179 9527482 ~ 9527757 (+)
G116019 NA non-coding downstream 127423 9564726 ~ 9566691 (+)
G116020 NA non-coding downstream 131161 9568464 ~ 9569497 (+)
G116021 NA non-coding downstream 132924 9570227 ~ 9570461 (+)
AMCG00018360 f100a other upstream 191798 9239811 ~ 9245234 (+)
AMCG00018358 polr3k,rpc11 other upstream 230256 9199657 ~ 9206776 (+)
G115789 NA other upstream 742313 8693364 ~ 8694719 (+)
G115648 NA other upstream 1314861 8119778 ~ 8122171 (+)
G115590 fbxl16,LOC107685932,LOC107568165,LOC107738613,LOC107568127,LOC107690242 other upstream 1542583 7893627 ~ 7894449 (+)
AMCG00018368 NA other downstream 2354 9439657 ~ 9447144 (+)
AMCG00018369 NA other downstream 43649 9480952 ~ 9486146 (+)
AMCG00018374 NA other downstream 75011 9512314 ~ 9513236 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other downstream 124758 9562061 ~ 9564564 (+)
AMCG00018380 NA other downstream 169358 9606661 ~ 9612918 (+)

Expression


Co-expression Network