Gene
RNA
| Item | Value |
|---|---|
| gene id | G116002 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 9472497 ~ 9477108 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU145266 | True | 285 | lncRNA | 0.39 | 2 | 9472497 | 9477108 |
| TU145267 | False | 285 | lncRNA | 0.39 | 2 | 9472497 | 9477108 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018365 | aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 | coding | upstream | 112811 | 9354703 ~ 9359686 (+) |
| AMCG00018366 | NA | coding | upstream | 176592 | 9291332 ~ 9295905 (+) |
| AMCG00018359 | mgrn1 | coding | upstream | 187079 | 9259454 ~ 9285418 (+) |
| AMCG00018355 | NA | coding | upstream | 284738 | 9162486 ~ 9187759 (+) |
| AMCG00018357 | NA | coding | upstream | 316044 | 9156181 ~ 9156453 (+) |
| AMCG00018373 | NA | coding | downstream | 42559 | 9519667 ~ 9520987 (+) |
| AMCG00018371 | NA | coding | downstream | 68433 | 9545541 ~ 9561135 (+) |
| AMCG00018383 | NA | coding | downstream | 198580 | 9675688 ~ 9685520 (+) |
| AMCG00018395 | NA | coding | downstream | 213718 | 9690826 ~ 9691578 (+) |
| AMCG00018385 | NA | coding | downstream | 231871 | 9708979 ~ 9711300 (+) |
| G115990 | NA | non-coding | upstream | 35194 | 9437032 ~ 9437303 (+) |
| G115939 | NA | non-coding | upstream | 242356 | 9228010 ~ 9230141 (+) |
| G115931 | NA | non-coding | upstream | 273057 | 9198877 ~ 9199440 (+) |
| G115896 | NA | non-coding | upstream | 435914 | 9036330 ~ 9036583 (+) |
| G115875 | NA | non-coding | upstream | 602155 | 8868542 ~ 8870342 (+) |
| G116011 | NA | non-coding | downstream | 50374 | 9527482 ~ 9527757 (+) |
| G116019 | NA | non-coding | downstream | 87618 | 9564726 ~ 9566691 (+) |
| G116020 | NA | non-coding | downstream | 91356 | 9568464 ~ 9569497 (+) |
| G116021 | NA | non-coding | downstream | 93119 | 9570227 ~ 9570461 (+) |
| G116022 | NA | non-coding | downstream | 94142 | 9571250 ~ 9571501 (+) |
| AMCG00018368 | NA | other | upstream | 25353 | 9439657 ~ 9447144 (+) |
| AMCG00018360 | f100a | other | upstream | 227263 | 9239811 ~ 9245234 (+) |
| AMCG00018358 | polr3k,rpc11 | other | upstream | 265721 | 9199657 ~ 9206776 (+) |
| G115789 | NA | other | upstream | 777778 | 8693364 ~ 8694719 (+) |
| G115648 | NA | other | upstream | 1350326 | 8119778 ~ 8122171 (+) |
| AMCG00018369 | NA | other | downstream | 3844 | 9480952 ~ 9486146 (+) |
| AMCG00018374 | NA | other | downstream | 35206 | 9512314 ~ 9513236 (+) |
| AMCG00018372 | LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 | other | downstream | 84953 | 9562061 ~ 9564564 (+) |
| AMCG00018380 | NA | other | downstream | 129553 | 9606661 ~ 9612918 (+) |
| AMCG00018405 | NA | other | downstream | 527165 | 10004273 ~ 10012673 (+) |
