G116020


Basic Information

Item Value
gene id G116020
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9568464 ~ 9569497 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145297
GACACCGTCATGGGCTTATCAAAAATAACATACACACGGTTGACCTgcaccaaaataaataagagtgtTACACTGGctgacaaagaaaatgaaatgatgtaGAAGCCGAACTACGAAAATAACTACTGGAAACATTTGAGTTTCGGGCCTAAAAAGTTAACCGGGCATTTGGTTTTGTGACTCGTCACAGAGTATGACTGAGATCGTTATCAAGGTATTGACCGGTGCCTCACCAAACCAGGCAGGACAGGCGCCAGCCACATGTGTCTCCCATCATGAGTGTCATTCACGCCATCAATCAGCTTGTCCGGAGTCCTCACGTCTCCAGAGACGCTGTCCAGGATATTGACACTGTCCGGGAAGGCCGCAATGTCTAGCACAGTCAAGGCTGCTTTGTGCAGTTGGagagtgttttgtgttttgtttttccttatcCTCACAGAATCAAAACTGGCATAAACTGGGGATAATGGCACCGTCTGATTGATCACTGACAGAGGAGACCACCAGCAATCCAGGAACAGGCACTGCGTGGAGGTAAAGGCGAGTGTTTGGGGTGATTGTAAAGGGTAAAGGGGTGTTTTTTTGGTAACAAGTGAGCTGGATTCCAAAGGGTCTGGGTTCTTCTGAGGTGTTTTGAATCCACCCACCCCTGCCCTGGGCTATAACACACACAAGAATAGAGCCAGCCatttcccctctccccctccttcaGGAAGGATACTGTTATCCGTGAGAGGGATCTTCTCATTGTGCTCGTCGTAGAACTCCAGGCTGTTCAGGCCAATATAGTAGGGGTCGCCCCAGGTCGTCAGCAACTGCAACTGGAATATAACTGGTGGAATGGGTTAAAGATAAGGCCGACAGACATTGGAACACTGGTAGTTTGGATGGAGTACATTGCTCAACAAGGAACTGAAGGATACATCCGCAAGGCATCAGAGGGGCTTCATAGTCCATGCTGGCCTGCTCCACCTTCTGTGAGACACTAGCACTGACAAGCAAGAAAGCAACGTCACTTAAGGAAATTTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145297 True 1034 lncRNA 0.48 1 9568464 9569497

Neighbor

gene id symbol gene type direction distance location
AMCG00018371 NA coding upstream 7329 9545541 ~ 9561135 (+)
AMCG00018373 NA coding upstream 47477 9519667 ~ 9520987 (+)
AMCG00018365 aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 coding upstream 208778 9354703 ~ 9359686 (+)
AMCG00018366 NA coding upstream 272559 9291332 ~ 9295905 (+)
AMCG00018359 mgrn1 coding upstream 283046 9259454 ~ 9285418 (+)
AMCG00018383 NA coding downstream 106191 9675688 ~ 9685520 (+)
AMCG00018395 NA coding downstream 121329 9690826 ~ 9691578 (+)
AMCG00018385 NA coding downstream 139482 9708979 ~ 9711300 (+)
AMCG00018384 NA coding downstream 156285 9725782 ~ 9729487 (+)
AMCG00018388 NA coding downstream 164714 9734211 ~ 9740498 (+)
G116019 NA non-coding upstream 1773 9564726 ~ 9566691 (+)
G116011 NA non-coding upstream 40707 9527482 ~ 9527757 (+)
G116002 NA non-coding upstream 91356 9472497 ~ 9477108 (+)
G115990 NA non-coding upstream 131161 9437032 ~ 9437303 (+)
G115939 NA non-coding upstream 338323 9228010 ~ 9230141 (+)
G116021 NA non-coding downstream 730 9570227 ~ 9570461 (+)
G116022 NA non-coding downstream 1753 9571250 ~ 9571501 (+)
G116024 NA non-coding downstream 4485 9573982 ~ 9575102 (+)
G116026 NA non-coding downstream 7493 9576990 ~ 9577191 (+)
G116027 NA non-coding downstream 7899 9577396 ~ 9577600 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other upstream 3900 9562061 ~ 9564564 (+)
AMCG00018374 NA other upstream 55228 9512314 ~ 9513236 (+)
AMCG00018369 NA other upstream 82318 9480952 ~ 9486146 (+)
AMCG00018368 NA other upstream 121320 9439657 ~ 9447144 (+)
AMCG00018360 f100a other upstream 323230 9239811 ~ 9245234 (+)
AMCG00018380 NA other downstream 37164 9606661 ~ 9612918 (+)
AMCG00018405 NA other downstream 434776 10004273 ~ 10012673 (+)
AMCG00018406 NA other downstream 474955 10044452 ~ 10046523 (+)
AMCG00018422 NA other downstream 688308 10257805 ~ 10292261 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other downstream 1682862 11252359 ~ 11256165 (+)

Expression


Co-expression Network