G116028


Basic Information

Item Value
gene id G116028
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9578837 ~ 9579097 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145305
TACTCATGGGAGATGGTCCAAAGTCCAGGACGATGAGGTCTCCAGCCTCCAGAGAGCACTGGCCTTTTTTATTGCCACGCGACTCCTCTGGAGGTGGGGCCTGCTTGGAGTGCAGCTGGAGCTCCTGCAGGCTGTCAGCGCTCTCCTCCCGCTCGATTTGCTCCTCCACCCAGTCCTCCTCGCCCCCGTCCGACTCCTCCCCCGCAGAGTCTCGGCTGCCCCTGCTGCTCCTgcgcacactcacactgacCTCCAGGCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145305 True 261 lncRNA 0.64 1 9578837 9579097

Neighbor

gene id symbol gene type direction distance location
AMCG00018371 NA coding upstream 17702 9545541 ~ 9561135 (+)
AMCG00018373 NA coding upstream 57850 9519667 ~ 9520987 (+)
AMCG00018365 aanat2,LOC107672440,LOC107670449,LOC107596820,LOC106934031 coding upstream 219151 9354703 ~ 9359686 (+)
AMCG00018366 NA coding upstream 282932 9291332 ~ 9295905 (+)
AMCG00018359 mgrn1 coding upstream 293419 9259454 ~ 9285418 (+)
AMCG00018383 NA coding downstream 96591 9675688 ~ 9685520 (+)
AMCG00018395 NA coding downstream 111729 9690826 ~ 9691578 (+)
AMCG00018385 NA coding downstream 129882 9708979 ~ 9711300 (+)
AMCG00018384 NA coding downstream 146685 9725782 ~ 9729487 (+)
AMCG00018388 NA coding downstream 155114 9734211 ~ 9740498 (+)
G116027 NA non-coding upstream 1237 9577396 ~ 9577600 (+)
G116026 NA non-coding upstream 1646 9576990 ~ 9577191 (+)
G116024 NA non-coding upstream 3735 9573982 ~ 9575102 (+)
G116022 NA non-coding upstream 7336 9571250 ~ 9571501 (+)
G116021 NA non-coding upstream 8376 9570227 ~ 9570461 (+)
G116034 dnah3,LOC108263105 non-coding downstream 33885 9612982 ~ 9613781 (+)
G116035 dnah3,LOC107561106 non-coding downstream 39573 9618670 ~ 9618905 (+)
G116088 NA non-coding downstream 110668 9689765 ~ 9747387 (+)
G116199 NA non-coding downstream 453456 10032553 ~ 10041833 (+)
G116214 NA non-coding downstream 541080 10120177 ~ 10121558 (+)
AMCG00018372 LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 other upstream 14273 9562061 ~ 9564564 (+)
AMCG00018374 NA other upstream 65601 9512314 ~ 9513236 (+)
AMCG00018369 NA other upstream 92691 9480952 ~ 9486146 (+)
AMCG00018368 NA other upstream 131693 9439657 ~ 9447144 (+)
AMCG00018360 f100a other upstream 333603 9239811 ~ 9245234 (+)
AMCG00018380 NA other downstream 27564 9606661 ~ 9612918 (+)
AMCG00018405 NA other downstream 425176 10004273 ~ 10012673 (+)
AMCG00018406 NA other downstream 465355 10044452 ~ 10046523 (+)
AMCG00018422 NA other downstream 678708 10257805 ~ 10292261 (+)
AMCG00018449 msrb1,LOC107376545,LOC105933050 other downstream 1673262 11252359 ~ 11256165 (+)

Expression


Co-expression Network