G116058


Basic Information

Item Value
gene id G116058
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 9480910 ~ 9482152 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU145342
GTGGAATACATTGGCATTGACACATAAAGGGTGAAAAACGCAAAAACAAAAGAGTGGCTGCGCTTTCTCCTGGCTGGCTTGCTGGTTTCCCCTTCATGTCCCAGTTTAAGGCCTTTAGCGGTACTTCTCAGCCAGAACCATGGCCACGATGGAGAGGAACTTGTCCCATGCAACATGTGCTTCAGGTGTGAAGTCAGCTCCCAGAGCGGCAGAGAGACTGACCAGTAAGGTGTGTCCCAGAAGCTTGAAGTTGACAGGGTCCACACGGAGGTTGTAGGCGTGCAGCTCACTGAGTTTGCTCAGGCTGCTATGGATGTCATCAATGCTGTTCACAGCCTGGCCAATGGCACCCACCACCTTGGCTCCATGGGCCTTCACCTGGGCAGAGCTGGAGCTCAGGTCCGCAAAGTGGGAGAAGTAGGTCTTGGTCTGAGGGAAGACGACGAGCAACCTGGACAGAGACTCGACGCCTAACTGCGCTGCCTTGGGGGAGACCTTGGCCCAAGTCTTGCTAATCTGCTCCTTGTCGGTGGCGCTGAGAGACATGGTTGTTTCGGGAGTTGTTGCTTTGGTAGTTTCTCAAGATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU145342 True 588 lncRNA 0.54 3 9480910 9482152

Neighbor

gene id symbol gene type direction distance location
AMCG00018370 nprl3,LOC106601082,LOC106607369 coding downstream 10327 9447484 ~ 9470583 (-)
AMCG00018367 NA coding downstream 100750 9360300 ~ 9380160 (-)
AMCG00018361 cdip1,LOC100712532,LOC103374307 coding downstream 263372 9207537 ~ 9217538 (-)
AMCG00018363 snrnp25,cp033,LOC106601091,LOC101481050,LOC107703331 coding downstream 281442 9194038 ~ 9199468 (-)
AMCG00018362 NA coding downstream 287969 9190764 ~ 9192941 (-)
AMCG00018378 NA coding upstream 6778 9488930 ~ 9490012 (-)
AMCG00018379 NA coding upstream 10075 9492227 ~ 9493398 (-)
AMCG00018375 NA coding upstream 41343 9523495 ~ 9526055 (-)
AMCG00018377 luc7l coding upstream 48686 9530838 ~ 9543701 (-)
AMCG00018376 NA coding upstream 84227 9566379 ~ 9584285 (-)
G115949 NA non-coding downstream 265093 9200800 ~ 9215817 (-)
G115874 NA non-coding downstream 618533 8861873 ~ 8862377 (-)
G115807 NA non-coding downstream 961707 8517334 ~ 8519203 (-)
G115732 NA non-coding downstream 1047340 8430126 ~ 8433570 (-)
G115599 sept12,LOC107568113,LOC107690244,LOC107733855 non-coding downstream 1612284 7860316 ~ 7868626 (-)
G116065 NA non-coding upstream 45340 9527492 ~ 9527736 (-)
G116136 NA non-coding upstream 302278 9784430 ~ 9788579 (-)
G116236 NA non-coding upstream 661273 10143425 ~ 10144599 (-)
G116255 NA non-coding upstream 681126 10163278 ~ 10163522 (-)
G116256 NA non-coding upstream 687096 10169248 ~ 10169622 (-)
AMCG00018364 ubald1,LOC105031098,LOC105928896,LOC106589553,LOC103131586 other downstream 222708 9239812 ~ 9258202 (-)
AMCG00018339 NA other downstream 804102 8666737 ~ 8676808 (-)
AMCG00018344 NA other downstream 832103 8641896 ~ 8648807 (-)
G115581 NA other downstream 1707018 7743218 ~ 7773892 (-)
AMCG00018291 NA other downstream 2828137 6610633 ~ 6652773 (-)
AMCG00018390 snu13,LOC101154660,LOC105910236 other upstream 292154 9774306 ~ 9779545 (-)
G116165 NA other upstream 436894 9919046 ~ 9924582 (-)
AMCG00018416 usp42 other upstream 638447 10120599 ~ 10136769 (-)
AMCG00018424 tecpr1,LOC102784946,LOC103372311 other upstream 820902 10303054 ~ 10332982 (-)
G116306 NA other upstream 853049 10335201 ~ 10342089 (-)

Expression


Co-expression Network