Gene
RNA
| Item | Value |
|---|---|
| gene id | G116264 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 10215387 ~ 10216789 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU145613 | True | 476 | lncRNA | 0.51 | 3 | 10215387 | 10216789 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00018411 | NA | coding | upstream | 41091 | 10160464 ~ 10174296 (+) |
| AMCG00018414 | pms2 | coding | upstream | 55744 | 10150965 ~ 10159643 (+) |
| AMCG00018413 | NA | coding | upstream | 64614 | 10137980 ~ 10150773 (+) |
| AMCG00018412 | LOC108437157,LOC107710695,LOC102303741,LOC101486233 | coding | upstream | 95333 | 10100924 ~ 10120054 (+) |
| AMCG00018415 | NA | coding | upstream | 120743 | 10089422 ~ 10094644 (+) |
| AMCG00018425 | NA | coding | downstream | 82214 | 10299003 ~ 10299554 (+) |
| AMCG00018423 | bri3 | coding | downstream | 116732 | 10333521 ~ 10342424 (+) |
| AMCG00018426 | NA | coding | downstream | 215401 | 10432190 ~ 10440657 (+) |
| AMCG00018429 | trrap,LOC107699870 | coding | downstream | 280084 | 10496873 ~ 10562962 (+) |
| AMCG00018432 | trrap | coding | downstream | 358107 | 10574896 ~ 10609128 (+) |
| G116214 | NA | non-coding | upstream | 93829 | 10120177 ~ 10121558 (+) |
| G116199 | NA | non-coding | upstream | 173554 | 10032553 ~ 10041833 (+) |
| G116088 | NA | non-coding | upstream | 468000 | 9689765 ~ 9747387 (+) |
| G116035 | dnah3,LOC107561106 | non-coding | upstream | 596482 | 9618670 ~ 9618905 (+) |
| G116034 | dnah3,LOC108263105 | non-coding | upstream | 601606 | 9612982 ~ 9613781 (+) |
| G116300 | NA | non-coding | downstream | 127946 | 10344735 ~ 10345082 (+) |
| G116301 | NA | non-coding | downstream | 134175 | 10350964 ~ 10351562 (+) |
| G116302 | NA | non-coding | downstream | 139183 | 10355972 ~ 10357357 (+) |
| G116303 | NA | non-coding | downstream | 142893 | 10359682 ~ 10359903 (+) |
| G116354 | NA | non-coding | downstream | 521497 | 10738286 ~ 10739175 (+) |
| AMCG00018406 | NA | other | upstream | 168864 | 10044452 ~ 10046523 (+) |
| AMCG00018405 | NA | other | upstream | 202714 | 10004273 ~ 10012673 (+) |
| AMCG00018380 | NA | other | upstream | 602469 | 9606661 ~ 9612918 (+) |
| AMCG00018372 | LOC106517353,LOC107388090,LOC103381742,LOC101078739,LOC103481046,LOC108270924,LOC108413555 | other | upstream | 650823 | 9562061 ~ 9564564 (+) |
| AMCG00018374 | NA | other | upstream | 702151 | 9512314 ~ 9513236 (+) |
| AMCG00018422 | NA | other | downstream | 41016 | 10257805 ~ 10292261 (+) |
| AMCG00018449 | msrb1,LOC107376545,LOC105933050 | other | downstream | 1035570 | 11252359 ~ 11256165 (+) |
| G116585 | rbbp6,LOC107689611 | other | downstream | 1749458 | 11966247 ~ 11970778 (+) |
| AMCG00018493 | prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 | other | downstream | 2272678 | 12489467 ~ 12500054 (+) |
| AMCG00018491 | slc5a10 | other | downstream | 2286234 | 12503023 ~ 12520331 (+) |
