G116577



Basic Information


Item Value
gene id G116577
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 11911014 ~ 11911336 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU146006
ttgtccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagatctacacaaggctggaatgggctacaagaccatcgccaagcagcttggtgagaaggtgacaacagttggtgcgattagtctccctcggtctggggctccatgcaagatctcacttCGTGGAATTTCAATGATCATGAAAAcagtgaggaatcagcccagaactacacggaaggatcttgttaatgatctcaaggc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU146006 True 290 TUCP 0.48 2 11911014 11911336

Neighbor


gene id symbol gene type direction distance location
AMCG00018466 NA coding downstream 349191 11542796 ~ 11561823 (-)
AMCG00018458 NA coding downstream 468936 11437510 ~ 11442078 (-)
AMCG00018457 pgp coding downstream 485526 11417434 ~ 11425488 (-)
AMCG00018459 NA coding downstream 493917 11411990 ~ 11417097 (-)
AMCG00018461 NA coding downstream 510447 11395104 ~ 11400567 (-)
AMCG00018473 NA coding upstream 15601 11926937 ~ 11944889 (-)
AMCG00018472 NA coding upstream 33963 11945299 ~ 11958566 (-)
AMCG00018474 NA coding upstream 49248 11960584 ~ 11967995 (-)
AMCG00018480 NA coding upstream 211537 12122873 ~ 12135103 (-)
AMCG00018479 NA coding upstream 227437 12138773 ~ 12147324 (-)
G116529 NA non-coding downstream 301444 11608137 ~ 11609570 (-)
G116511 NA non-coding downstream 378944 11531798 ~ 11532070 (-)
G116501 NA non-coding downstream 396521 11511463 ~ 11514493 (-)
G116454 NA non-coding downstream 557917 11280366 ~ 11353097 (-)
G116446 NA non-coding downstream 657449 11252359 ~ 11253565 (-)
G116610 NA non-coding upstream 182133 12093469 ~ 12118810 (-)
G116619 NA non-coding upstream 208472 12119808 ~ 12120607 (-)
G116672 NA non-coding upstream 384125 12295461 ~ 12298711 (-)
G116749 NA non-coding upstream 963579 12874915 ~ 12876763 (-)
G116750 NA non-coding upstream 968329 12879665 ~ 12884422 (-)
G116428 NA other downstream 708126 11199578 ~ 11202888 (-)
AMCG00018440 NA other downstream 764074 11088174 ~ 11146940 (-)
AMCG00018437 srebf1,LOC107713935 other downstream 827234 11061628 ~ 11083780 (-)
AMCG00018431 trrap other downstream 1330909 10562554 ~ 10580105 (-)
G116307 LOC108412765,LOC107713954,LOC107665916,LOC107691223,LOC107548703 other downstream 1525798 10360129 ~ 10385216 (-)
AMCG00018490 NA other upstream 376232 12287568 ~ 12290544 (-)
AMCG00018522 NA other upstream 1341749 13253085 ~ 13257250 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other upstream 1734032 13645368 ~ 13727870 (-)
AMCG00018555 LOC107689851 other upstream 2331209 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 2592067 14503403 ~ 14520875 (-)

Expression



Co-expression Network