G116976


Basic Information

Item Value
gene id G116976
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 13846890 ~ 13847092 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146533
GCTACACCCAAGGGCAAAAGTCAAGGACAGCTGGTaataaaaggttttttttttttttgtttgtttcctggtATTGATACCCTTGAACTTAGGTTGAGAGGAAATGCTCAGTGGCAGTTTGAACTAATGGTTCTGCATTAACAATTgcaataaaaatagtttaaaaggaCTTGACAATCCAGTCACCTTAGTTTGAAAAGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146533 True 203 lncRNA 0.35 1 13846890 13847092

Neighbor

gene id symbol gene type direction distance location
AMCG00018527 NA coding upstream 61341 13782714 ~ 13785549 (+)
AMCG00018526 fscn1a,fscn1,LOC107742378,LOC107581720,LOC107674660 coding upstream 197798 13639723 ~ 13649092 (+)
AMCG00018523 tnrc18,LOC107742388 coding upstream 312063 13468893 ~ 13534827 (+)
AMCG00018515 cpsf4,LOC107578701,LOC107720053 coding upstream 594645 13246534 ~ 13252245 (+)
AMCG00018516 bud31,LOC106595689 coding upstream 609204 13235201 ~ 13237686 (+)
AMCG00018530 LOC108430595 coding downstream 12803 13859895 ~ 13878065 (+)
AMCG00018534 arpc1a,LOC107720063,LOC107674705,LOC107591778 coding downstream 38688 13885780 ~ 13902661 (+)
AMCG00018533 mmd2,LOC107725363,LOC103909971 coding downstream 94536 13941628 ~ 13960988 (+)
AMCG00018536 NA coding downstream 125458 13972550 ~ 13985601 (+)
AMCG00018547 NA coding downstream 264612 14111704 ~ 14111910 (+)
G116975 NA non-coding upstream 6919 13839716 ~ 13839971 (+)
G116941 NA non-coding upstream 155523 13666023 ~ 13691367 (+)
G116882 NA non-coding upstream 479862 13366640 ~ 13367028 (+)
G116790 NA non-coding upstream 631538 13129738 ~ 13215352 (+)
G116775 NA non-coding upstream 798796 13047117 ~ 13048094 (+)
G117130 NA non-coding downstream 395772 14242864 ~ 14244203 (+)
G117131 NA non-coding downstream 397616 14244708 ~ 14245318 (+)
G117197 NA non-coding downstream 590900 14437992 ~ 14439091 (+)
G117209 NA non-coding downstream 686871 14533963 ~ 14534200 (+)
G117353 NA non-coding downstream 889004 14736096 ~ 14738327 (+)
AMCG00018520 slc29a4,LOC107703421,LOC107737679,LOC107581724 other upstream 500013 13307898 ~ 13346877 (+)
G116832 NA other upstream 591096 13253343 ~ 13255794 (+)
AMCG00018498 NA other upstream 1235011 12543545 ~ 12611879 (+)
AMCG00018491 slc5a10 other upstream 1326559 12503023 ~ 12520331 (+)
AMCG00018493 prpsap2,LOC107737786,LOC107581734,LOC107720040,LOC107654541 other upstream 1346836 12489467 ~ 12500054 (+)
AMCG00018537 radil,LOC107725399,LOC107722964,LOC107590699,LOC107564693 other downstream 150817 13997909 ~ 14022806 (+)
G117033 NA other downstream 199167 14046259 ~ 14049153 (+)
AMCG00018538 LOC103397138,LOC107554284,LOC100698873 other downstream 294285 14141377 ~ 14145995 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other downstream 341911 14189003 ~ 14191077 (+)
AMCG00018551 NA other downstream 392150 14239242 ~ 14242717 (+)

Expression


Co-expression Network