G117033


Basic Information

Item Value
gene id G117033
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14046259 ~ 14049153 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146602
tacaaaggaTACGttcacatatataaaaaaaataaacaaatatgaaggtccaagaaaaaaaaaaaattcacacaaatacaattcagtCTCTGTGCTATCAGGATGTACCGTATGTATTGCCAGAGATGCTGGTGACGGGGAGAGCATGTTTCCCGTTCTGAGTGACAGGCCTAACAGGCAGCTGGTGCTGGCCCAGAGAGATGGGTGCCGCCTGTTGCACGATTGTGAAGGTCTGTCCAGTGCCGCCCTGGCTGACATGGCTGCTCACTGCCTGGATCACCCGGCTGGCAGTTGGGATTGTTGTGTAGGTCACCATGGGCTTCTCCTCTCCCATACCTGTCATCACAAACACTCCATCACACACCTGCCTTCTGGGACTCATACAAACTGTATCCCAAAGTGCTCCCCTTGTCACCTTCCCTTGCACGGTGGAagtagtttttttaatgaacaactAAAATGGGTTCGTTTGAAttcaataataacattattccTGTTTATAAACAGAACACTACCAGCCTAGAGTaactaaaaaaaatagttcTCCACGCAAtccactttattttttccatgaatTCAAGATGGGAAACGACATCTTCTGCAGTACAACTACCATTTCCTGAAAACTGCAGTAGGTAGCAAAAATAAAAGAGTGCTAGTTCACAGTACATGTAtaatgatataatggcaagtaaacactgctttatgatgaaaactaaaaacaaatagaaaaatgccatcaacacatttatacatttctcatttcggggataatttgaaaataattgattattgCCTTAGCTACTGTAACAACATATTACTTAAAATTGATTTAGTCTTTCTTTACAAAAGCTCTTCAGGGATAATTCACATAACCTTTTTTTGATATCATGTTTTACAGCGGTCATTCAGACAGCATTTACAAAAagtgattattataattataataaactacatatttcagcatttcagtGCGTTTCTTGAGTATGACCATATAATGCTTAGACCGGACAACACTGGCAGACCATTGGTGTGAAGCTGGGTCTGAGTGTTGCAGCACATCTCACTGAATACTTTTTGCTCTCTCTACTCCCTCGGTAATGCAAGTCCACACTCTGTGTTGTCAGTAAAACTCTTACTGAAGGCAGTAGGGAAGTGACTTGGGGATGCAGCCCCTATATATTCTACTACTTCTTCTAGGTGGTCTGTCAATCTCACCATATGAGCTAAAACAGCCTAGTCCTACTTCTCCTTCCTCTTCACCCCCTGCTCATCAACCTACTTTTATTAATAGTAtcattatttcttggcagatgcccttgtccagggcgacttgcaGGTTCTCAGCTGATGAGTGACTTTCTCCTCTAAAAGCTCTGAAATTCAACAAACCTTCCCTCCCTCAATCCCTTCATGCAGAACCTCAATCACCCTTGTGGGTGGACTGCGAATATTGAGGCTGAGATCAAATCAAATCTAAGATTCAAGTTAGAATCACAGATTCTGCCTGAATGCACATAacgatttaatttaattcccatAGTGGAGTAAATCCacaagaaattaaacaataaaatgaaaaagctaaAGTGAAGAAAGAAGTTGCCAGAGTAAAACACAAATCAACCACATACTGATAATGACACCCTACCTTCACcaattgatatatatacagtgagggaaaaaagtatttgatcccctgctgatttttatgtttgcccaatgacaaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146602 True 1732 TUCP 0.40 3 14046259 14049153

Neighbor

gene id symbol gene type direction distance location
AMCG00018536 NA coding upstream 60658 13972550 ~ 13985601 (+)
AMCG00018533 mmd2,LOC107725363,LOC103909971 coding upstream 85271 13941628 ~ 13960988 (+)
AMCG00018534 arpc1a,LOC107720063,LOC107674705,LOC107591778 coding upstream 143598 13885780 ~ 13902661 (+)
AMCG00018530 LOC108430595 coding upstream 168194 13859895 ~ 13878065 (+)
AMCG00018527 NA coding upstream 260710 13782714 ~ 13785549 (+)
AMCG00018547 NA coding downstream 62551 14111704 ~ 14111910 (+)
AMCG00018539 NA coding downstream 110510 14159663 ~ 14161738 (+)
AMCG00018549 NA coding downstream 142985 14192138 ~ 14200344 (+)
AMCG00018552 LOC108412053,LOC101077666 coding downstream 181837 14230990 ~ 14232314 (+)
AMCG00018550 NA coding downstream 183569 14232722 ~ 14237949 (+)
G116976 NA non-coding upstream 199167 13846890 ~ 13847092 (+)
G116975 NA non-coding upstream 206288 13839716 ~ 13839971 (+)
G116941 NA non-coding upstream 354892 13666023 ~ 13691367 (+)
G116882 NA non-coding upstream 679231 13366640 ~ 13367028 (+)
G116790 NA non-coding upstream 830907 13129738 ~ 13215352 (+)
G117130 NA non-coding downstream 193711 14242864 ~ 14244203 (+)
G117131 NA non-coding downstream 195555 14244708 ~ 14245318 (+)
G117197 NA non-coding downstream 388839 14437992 ~ 14439091 (+)
G117209 NA non-coding downstream 484810 14533963 ~ 14534200 (+)
G117353 NA non-coding downstream 686943 14736096 ~ 14738327 (+)
AMCG00018537 radil,LOC107725399,LOC107722964,LOC107590699,LOC107564693 other upstream 23453 13997909 ~ 14022806 (+)
AMCG00018520 slc29a4,LOC107703421,LOC107737679,LOC107581724 other upstream 699382 13307898 ~ 13346877 (+)
G116832 NA other upstream 790465 13253343 ~ 13255794 (+)
AMCG00018498 NA other upstream 1434380 12543545 ~ 12611879 (+)
AMCG00018491 slc5a10 other upstream 1525928 12503023 ~ 12520331 (+)
AMCG00018538 LOC103397138,LOC107554284,LOC100698873 other downstream 92224 14141377 ~ 14145995 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other downstream 139850 14189003 ~ 14191077 (+)
AMCG00018551 NA other downstream 190089 14239242 ~ 14242717 (+)
AMCG00018564 mlec,LOC106579938 other downstream 281688 14330841 ~ 14399539 (+)
G117178 NA other downstream 295937 14345090 ~ 14347741 (+)

Expression


Co-expression Network