G117066


Basic Information

Item Value
gene id G117066
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14095291 ~ 14100107 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146648
AGCAGGATCATGGCAAGGATACAGGAGCACCCACAATGGACACACAGCCAACCCCCCGAACCAGGATCCCCACTGCAGGACAGGAGAGCCTGCCAAGGATCTGCAGCCACCTACCTGCTGACTGACTGGCCTGACCGCTCGTGAAGGGGGAAGTCTCCATTCCCATTGGAAACATCATGCCAAGAGCCTGCATTAGAATGCCATTCTGGATCCTCTGCACACGTTCTGTGTCCCCCACGGCCATTGCCTGAACCAGTTCCACAGAGGTTTTGCTGGAACCTATGATGGGAATACCATCACAggtttcccccccccacaccatctGAGAGGAAGACATCACCTCTGACTTGTGTTCTGGAGACCTGTAGTGATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146648 True 375 lncRNA 0.55 3 14095291 14100107

Neighbor

gene id symbol gene type direction distance location
AMCG00018548 foxk1,LOC107720067,LOC107703411,LOC107748300 coding downstream 5091 14089796 ~ 14090200 (-)
AMCG00018545 NA coding downstream 32171 14041641 ~ 14063120 (-)
AMCG00018546 NA coding downstream 58659 14021055 ~ 14036632 (-)
AMCG00018535 wipi2,LOC107720064 coding downstream 179336 13903619 ~ 13915955 (-)
AMCG00018532 NA coding downstream 237701 13851411 ~ 13857590 (-)
AMCG00018540 LOC103397138,LOC107554284,LOC100698873 coding upstream 43069 14143176 ~ 14152386 (-)
AMCG00018541 tfip11,LOC102785266 coding upstream 53416 14153523 ~ 14158352 (-)
AMCG00018542 NA coding upstream 61882 14161989 ~ 14172891 (-)
AMCG00018543 NA coding upstream 73994 14174101 ~ 14178312 (-)
AMCG00018544 LOC107658624 coding upstream 82386 14182493 ~ 14184291 (-)
G117015 arpc1b non-coding downstream 129022 13897500 ~ 13966269 (-)
G117012 arpc1a,LOC102781765 non-coding downstream 205188 13887421 ~ 13890103 (-)
G117011 arpc1a,LOC107388895,LOC107674705,LOC107703414 non-coding downstream 207924 13886309 ~ 13887367 (-)
G116949 NA non-coding downstream 474859 13620223 ~ 13620432 (-)
G116931 NA non-coding downstream 560455 13528696 ~ 13534836 (-)
G117122 NA non-coding upstream 132689 14232796 ~ 14233624 (-)
G117221 NA non-coding upstream 212151 14312258 ~ 14399555 (-)
G117223 NA non-coding upstream 221978 14322085 ~ 14408949 (-)
G117227 NA non-coding upstream 257328 14357435 ~ 14402346 (-)
G117234 NA non-coding upstream 266358 14366465 ~ 14367911 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 367421 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 838041 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 1804747 12287568 ~ 12290544 (-)
G116577 NA other downstream 2183955 11911014 ~ 11911336 (-)
G116428 NA other downstream 2892403 11199578 ~ 11202888 (-)
AMCG00018555 LOC107689851 other upstream 142438 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 403296 14503403 ~ 14520875 (-)
G117377 NA other upstream 636031 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 1398555 15498662 ~ 15518315 (-)
G117784 NA other upstream 2908791 17008898 ~ 17009301 (-)

Expression


Co-expression Network