G117122


Basic Information

Item Value
gene id G117122
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14232796 ~ 14233624 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146724
CATCTGGGCTCTGCAGTAGCAGCTGTGTCCCCCATTGTCTTCTCTGTCCTCCtgcttctctctgtgtctcacagtgcgctctcctctctctctctgtgcctccgGTCCTCCATCCCTCCGGGGTCACCGGCTCCTCTGTCGTTCTTGTTGACTGTTTCGTCTCGTATGTCCACGGCCTCCAGAGCTCAGgaccacacagcacagcactacaatAACAGTACAATGAAGAAGTAGGATACACCCTGGTACTATACAGCGATAAAACCGCAGAATACTGCAATGGCGCTATAATGTACAGTGTATTGCGCTTACGGTGTATTGTTTAGTGCACTGTATTGCACGGTTATACTGTTGTGTATTTCGGTCCCATGCACAATAGTGTCCGGTGTATTAAGCGCAGAGTAATCCCGCAGCGCAGCTCCGTCCAGTTTTGTGATAGTTGACGCGCACTTCCTGTATGAGTTCGCGACGGTCGGGTGGCTGTGCCGGCGCGGTCTCCCCCGGCTGCTCTCTGCTGGCTCTGGGATGCACACAGTGTACCTCTGCTTCTCCGCCTCTCTACTTCACTCTCTTGCCATTTCTTTCATGCTTTCATTTACGTCTGTGCAGTCTCACGGAGTAATGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146724 True 626 lncRNA 0.53 2 14232796 14233624

Neighbor

gene id symbol gene type direction distance location
AMCG00018554 msi1,LOC100704609 coding downstream 9479 14208436 ~ 14223317 (-)
AMCG00018556 NA coding downstream 26673 14205321 ~ 14206123 (-)
AMCG00018557 NA coding downstream 30509 14201096 ~ 14202287 (-)
AMCG00018544 LOC107658624 coding downstream 48505 14182493 ~ 14184291 (-)
AMCG00018543 NA coding downstream 54484 14174101 ~ 14178312 (-)
AMCG00018560 NA coding upstream 32471 14266095 ~ 14288995 (-)
AMCG00018561 grk3,LOC107689528,LOC107758628 coding upstream 59594 14293218 ~ 14316293 (-)
AMCG00018563 NA coding upstream 87707 14321331 ~ 14328617 (-)
AMCG00018559 NA coding upstream 99168 14332792 ~ 14359292 (-)
AMCG00018562 NA coding upstream 135460 14369084 ~ 14370273 (-)
G117066 NA non-coding downstream 132689 14095291 ~ 14100107 (-)
G117015 arpc1b non-coding downstream 266527 13897500 ~ 13966269 (-)
G117012 arpc1a,LOC102781765 non-coding downstream 342693 13887421 ~ 13890103 (-)
G117011 arpc1a,LOC107388895,LOC107674705,LOC107703414 non-coding downstream 345429 13886309 ~ 13887367 (-)
G116949 NA non-coding downstream 612364 13620223 ~ 13620432 (-)
G117221 NA non-coding upstream 78634 14312258 ~ 14399555 (-)
G117223 NA non-coding upstream 88461 14322085 ~ 14408949 (-)
G117227 NA non-coding upstream 123811 14357435 ~ 14402346 (-)
G117234 NA non-coding upstream 132841 14366465 ~ 14367911 (-)
G117245 NA non-coding upstream 183741 14417365 ~ 14459293 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 504926 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 975546 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 1942252 12287568 ~ 12290544 (-)
G116577 NA other downstream 2321460 11911014 ~ 11911336 (-)
G116428 NA other downstream 3029908 11199578 ~ 11202888 (-)
AMCG00018555 LOC107689851 other upstream 8921 14242545 ~ 14263154 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other upstream 269779 14503403 ~ 14520875 (-)
G117377 NA other upstream 502514 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 1265038 15498662 ~ 15518315 (-)
G117784 NA other upstream 2775274 17008898 ~ 17009301 (-)

Expression


Co-expression Network