G117209


Basic Information

Item Value
gene id G117209
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14533963 ~ 14534200 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146834
CTTGATCATCTGTATGCAGTGGCTCATAGAGGTGGCACGGACGCAGACCAGCGGGTCAGACTTTATGTTCAGAGCCCAGTGCTCACACTTCATCTGCTCTGCAGCACTAATACAGCACCAACGCACTACACTGTCCTCCAGAGAGCTgcctgcaacacagacacattaatacacagacattaacacacacacacacacatactgacacagtTCCAGCACACCATATTGTCCTCCAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146834 True 238 lncRNA 0.50 1 14533963 14534200

Neighbor

gene id symbol gene type direction distance location
AMCG00018575 NA coding upstream 4526 14519852 ~ 14529437 (+)
AMCG00018576 slc5a1,LOC107713298,LOC106563210,LOC105913283,LOC105014972 coding upstream 14944 14511238 ~ 14519019 (+)
AMCG00018578 LOC104951472,LOC102789619,LOC107752382,LOC102207611 coding upstream 29904 14498599 ~ 14504059 (+)
AMCG00018579 NA coding upstream 38162 14479080 ~ 14495801 (+)
AMCG00018580 NA coding upstream 55630 14476918 ~ 14478333 (+)
AMCG00018583 NA coding downstream 8130 14542330 ~ 14547480 (+)
AMCG00018582 pisd,LOC107663775 coding downstream 17894 14552094 ~ 14554070 (+)
AMCG00018581 NA coding downstream 19889 14554089 ~ 14557800 (+)
AMCG00018577 NA coding downstream 40060 14574260 ~ 14588028 (+)
AMCG00018585 NA coding downstream 65062 14599262 ~ 14614445 (+)
G117197 NA non-coding upstream 94872 14437992 ~ 14439091 (+)
G117131 NA non-coding upstream 288645 14244708 ~ 14245318 (+)
G117130 NA non-coding upstream 289760 14242864 ~ 14244203 (+)
G116976 NA non-coding upstream 686871 13846890 ~ 13847092 (+)
G116975 NA non-coding upstream 693992 13839716 ~ 13839971 (+)
G117353 NA non-coding downstream 201896 14736096 ~ 14738327 (+)
G117381 NA non-coding downstream 249306 14783506 ~ 14784333 (+)
G117382 NA non-coding downstream 251825 14786025 ~ 14786487 (+)
G117387 NA non-coding downstream 258596 14792796 ~ 14793804 (+)
G117388 NA non-coding downstream 259685 14793885 ~ 14794239 (+)
AMCG00018567 NA other upstream 121684 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 134424 14330841 ~ 14399539 (+)
G117178 NA other upstream 186222 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 291246 14239242 ~ 14242717 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other upstream 342886 14189003 ~ 14191077 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other downstream 239915 14774115 ~ 14777110 (+)
G117383 NA other downstream 252423 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 420364 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2534012 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3446940 17981140 ~ 17983017 (+)

Expression


Co-expression Network