G117267 (ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033)


Basic Information

Item Value
gene id G117267
gene name ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14503403 ~ 14520875 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU146918
ttttttttttaaacagTACACCTGGAGAAGCCTTTATTTCAGCCCAGCCAACCCAACACCATTCCCATCACTGCTTtgattggttgtttttgttagattttgtttttataacccTAATTTTGGCATTCAGACCCAAGTTCACTTCTCATCAGGTCTAACAGAGTCTGGTCAAAGAAACTCTGCAAGCAACCAACTGATCAGCAaatttcttcaaataaataaatcaataaatacaaataaaagataacagtagaaatcacttaaaatgttcAGTTAAACAATAAGATTTATATCTCAGACGCGTCTCACAAGCGCCTCAGCAAAGGCAACGGGTGTGTCAAACAGATGCCTGTGACACCGAAAATTCACATCACGTACACatggcaacaaaataaaacagtaaaagaaTTGTCTGGTTAATGTTACAGCGTTACAGTCAGTCTGTAAACAGACACAAGGTTCTGCTCTCAGTACAGTCACATTCCTGATTCCACAGGCTTGATAACCAGGTTTAATTACAAAACCCTTTGATTAGAATCATTATTTTCGTTTGCAATGCAAAGCATTAAACCAGCTTTTCCTCTTGCAGCCTGATTCCTCACTTAATTCCCTTAATAACAGATGTGGAATATAGGAACACTGTTATTTTCATTagattaatattatcattatactgtcttgtttttttatttcattttgtattgatcaTCTAAACAATATGCTTCACTTGGAAACATGTCAGCTATTTCAGAACAGTTCATATGCAACTATgttaaggagaaaaaagaaaatatatatagaataaacAGCTTTAAATGCCAGTTCTTGACTTTCACTTGTTTTCTTCCATCTGCTTACCTATTTATGACGCATGCCGTCAGGACGTCAACTGTTTGACTGAGACTCTGTTCCCTTAACCTCTCTGTGAATGTAGCGCCAGAGCAAAGCACCACAGTGCCACCCCTCCTGCCCAGTCAACCCGCTTCTTCAGCCGGCCCGGGCTCTGGCTCCTCTGAGGGTCACAGTGGTGAcgtgtgtagctgtgtgtgtgtgtgtgtgtgtgtgtgtctgcaagTCTGTCTACATGTGAGTTTCTGTGTATATGGGTGTCTCTACATGTGTCATTTGTGCCATTATGCAACTGCCCTTGAGGAGGCGAGCCACAGAcgcaaacaacaacagcaaaacaatgcTGTAGCtgtgaaagcaaagaaacacacacaaaaacacacactcacacattcagACAGACACTCATATGACACAGGACTTGTACGGAGCTGGggggaagagaggaggagagacaggAGGCCTCATCCTCTTGGGAATCCATAAAGAGGTAAGCAGGAGCGtttcatgtattcattaatttattatttctgtactgattttaacatatatactccacagagaaactgaaaacagtcCCATCCATAGAAACCTCTCTGAGTGTGTACGTTGCCATGCCCTGTAGCGTTTATATACGAGTAGAAATATACACCGACTATccgtgtgtgtaaatgtgtgtatacgTATACATACAGGCATGTGAAAAGCTCGAGGCCCGTTTTAAAAATGCCAACACACACCCATCACTTGCAATGAAGACAATATTATTACTTGAGATAAATGTTTGTACTCAGACCAGTGGACAGCAGTTGAACCAGCTCAGGGGACAGTAGATATAGTCAGTGACAGGCTGAGTAGCatggagacagagggaggggaaggggaggagTGATGGGGGGACAGGGAGGATATGGATCGGGGGaacagaaggagaggaggagaagggacGGGGGCATTGTGTGAACGTAGGGGGGGTACAGATCTCTCATCGCGGGATTTTTTGAAGAAGCAATCTGGGAACAGAGGGTGTAGTTTATTGATTAGATGGGGAGGGGACAGGACACAGAGGACAGGGGAGGATTGTCAGACAAGGGCTGGAGGAGAGGGGAAGgatggagaaggagaaggaagaggtgGAGGGGAAAGGGAAAAAGACAAAGAGGAGACGGGACAGTTAAGGATGGGGCGAGGGGGTCGGGGGatagaagcagcagcagccagcATTATTGGCGGgcgggggatgggggggtgggtggtGTAGCAGCAGGAGTTGGGTACAGCAGGGGCAGGGGGAGGATCCTTCGCTCGCTCGTGCGCTTGCTGCTCTttccccacctcctcctcctccgcctcctccctccctcttccctctcctcagtTGTTGGCCTCGCCCGCCTCCTCATCCTGCTGGTCGCTGGTCCACAGGGTCAGATTATCTCGCAGCAGCTGCATGATGAGGGTGGAGTCCTTGTAGGAGTCCTCGTTCAGAGTGTCCAGCTCGGCGATGGCGTCGTCGAACGCTTGCTTGGCCAGGTGGCAGGCCTGCTCAGGCGCGTTCTGGATCTCGTAGTAGAAGACGGAGAAGTTGAGGGCCAGGCCCAGGCGGATGGGGTGGGTGGGCTGCATGTGCTCCTTGCTGATCTCGAAGGCCTCCTTGTAGGAGCCCTCGGAAGACTCCACCACAGCCGCCCGCTTCTCCCCCGTGGCCACCTCCGCCAGGTACCGGTAGTAATCGCCCTTCATCTTCAGGTAGAACACCTTGCTTTCGAACTGCGAGTCGTTGCAGTTCTTGATGAGGAACTTGTCCAGCAGGGAGAGGACGTCGCTGCACACCGTCTCCAGCTCTTTCTCGATCTTCTCCCGGTACGCGCGCACCATCTCCAGCTTCTTCTCGTTGCCGTCCGCCGAGGTCTTCTGCTCGATGCTGCTGATGACGCGCCAGGACGAGCGCCGCGCCCCCACCACGTTCTTGTAGGCCACCGACAGCAGGTTGCGGTCCTCGTTGGACAGCGGCTCATTCAACTCCGTCAC

Function

symbol description
ywhag1 Acts upstream of or within brain development and heart development. Predicted to be located in cytoplasm. Is expressed in head; nervous system; neural tube; otic vesicle; and trigeminal placode. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 56. Orthologous to human YWHAG (tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma).
ywhag Enables identical protein binding activity; insulin-like growth factor receptor binding activity; and protein kinase C binding activity. Involved in regulation of neuron differentiation and regulation of synaptic plasticity. Located in extracellular exosome; focal adhesion; and membrane. Implicated in developmental and epileptic encephalopathy 56. Biomarker of Creutzfeldt-Jakob disease.

NR:

description
14-3-3 protein gamma-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU146918 True 2880 TUCP 0.49 2 14503403 14520875

Neighbor

gene id symbol gene type direction distance location
AMCG00018571 gnaz,LOC107555529,LOC107686467,LOC107744122 coding downstream 42725 14450935 ~ 14460678 (-)
AMCG00018574 NA coding downstream 59503 14438004 ~ 14443900 (-)
AMCG00018573 acads coding downstream 65623 14433946 ~ 14437780 (-)
AMCG00018572 NA coding downstream 86149 14410503 ~ 14417254 (-)
AMCG00018562 NA coding downstream 133130 14369084 ~ 14370273 (-)
AMCG00018584 NA coding upstream 9127 14530002 ~ 14539282 (-)
AMCG00018587 drg1 coding upstream 70398 14591273 ~ 14596238 (-)
AMCG00018592 NA coding upstream 126217 14647092 ~ 14648105 (-)
AMCG00018591 NA coding upstream 127268 14648143 ~ 14702246 (-)
AMCG00018589 rab35,LOC103397428 coding upstream 217519 14738394 ~ 14749164 (-)
G117254 NA non-coding downstream 24466 14478095 ~ 14478937 (-)
G117253 NA non-coding downstream 26184 14476990 ~ 14477219 (-)
G117245 NA non-coding downstream 44110 14417365 ~ 14459293 (-)
G117223 NA non-coding downstream 94454 14322085 ~ 14408949 (-)
G117227 NA non-coding downstream 101057 14357435 ~ 14402346 (-)
G117293 NA non-coding upstream 57361 14578236 ~ 14588050 (-)
G117319 NA non-coding upstream 114529 14635404 ~ 14636339 (-)
G117338 NA non-coding upstream 182765 14703640 ~ 14704458 (-)
G117432 NA non-coding upstream 259412 14780287 ~ 14784313 (-)
G117438 NA non-coding upstream 312981 14833856 ~ 14835725 (-)
AMCG00018555 LOC107689851 other downstream 240249 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 775533 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1246153 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 2212859 12287568 ~ 12290544 (-)
G116577 NA other downstream 2592067 11911014 ~ 11911336 (-)
G117377 NA other upstream 215263 14736138 ~ 14738312 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 977787 15498662 ~ 15518315 (-)
G117784 NA other upstream 2488023 17008898 ~ 17009301 (-)
G117823 NA other upstream 2705215 17226090 ~ 17256271 (-)
G117899 NA other upstream 3082481 17603356 ~ 17603848 (-)

Expression


Co-expression Network