G117353


Basic Information

Item Value
gene id G117353
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14736096 ~ 14738327 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147042
gGGAAAATGAGTAATACATCTTAGATCTCCAGTGTACAGCGAACCACAGTTTAAAGAGAAAACAGGTTCaatctttttattatatatatatatatatatatatatatacacatacatacacatgcatacatatatatatgtatatattttacacacaaaaatattttttaaaactttgcAGTTTCCCCATTGAGTTGTTTTCTCATTCTTGTTTTGCTCTGTAATTCTGTGCCTTTTTGGCATAAGGTCCAATACTGAATATTTACAAGTGATTCCAGACCCTCTACAGACCAGCACATACTGACACGTAAACCATCCCGTTCCACCGCTCTGACCACCAGAACCTCGCTTCCACGtcactgtctctccctctcgTCTCTGCTGGAGTGCCAGCACCGTGACGCAGTCCCCCCCCCAATAAGGCCTGGCCTGCTCAGACATTTCATCccagatttgtattttctgtgtttcaaGTTCCACGTAGGTTCAAAGCCCTGAATCACTGGAGGTGGGGGACGAGCCTGGGGTGGGAATTTCTGTTTTCTGGGTTTTTGGTCCCACAGGTTTAAACCCCAGGAGGATATCGATAACGCTGGCCTTTTAACCGCAGTGCTTTCTGTTGGTGGGGGCAATACAGGCTGATGCACAGACAAGGGCACCAGAGGGAAGGGGGTGAGGGTGAGCAAGATGTGAAAGCTTTGCCAGGAGCCCCCCGCTTCCCCCTGGCCAGCCCTTGCTGGGAACCCTGGAGTCATCCTGCGCCCGGGCGGTGATGCATTTTCTGTCAGGGGGAATAGGAAGGGTCGTCCCACTTGTTGCCCGTGTCGTTGCACTGGAGCGCGGAGTCTGCAGGGGAAGTTGTAGGGGGGGTGGCGTAGACTTATGTCATCGTCCCCATCCCCCCCCGGAGGGTCAGGCAGAAGGGGGGTGTGGGGTAGGTGGGGCTTTCAGACCCAGTGAATCACCGTGCAAAATCCTCTTCCACCCCCCCCCCGGCCCACAACCTCCACAAACAAATGCTCAGGAGCAAGACAGAAAACACCAATCAGCACAGAGCGGGGCCGGGGGGCAGCGCCAATCAGCTGGAGTGtgaaaaaatctctctctctatttatgttttgtattaaacggtttgtgtgtgcgtgggggggggtgtgtgtatcatcatttgtaaaaaacaaaaacaaaaaaaaaaaaactaattaataataacaatagaaTTACCAAAACCAATATGGTCACTTTACTCCCATAGCCACAGAGTACACCAATAGTCTGCTCCTACTCTGCACCCCCCTGCCTTTGCCACTCTGTGCCTTCTCGCCAGGCGAAACACAggccacccccccacaccacagGCCTCTCCCGGATCCTGACAGAGCTGCCAATCGGAGTCAAAGAAACAACGGAGCTCCCTCTCCCTGCTGTTAGACGCAACACACCAGGCTCCCCTCCCTGCGGAGAGCTGCACCGCTGATGGAGATTGCTCCATGTAGGGAGGGGAGATGTAAGCCTAATCAGCCAGTCAGCCTCTCTGGGGAACAAGCAAGGCTCTCCCTTATGGCTCAGATCCCACAGTCATGCTGGAGAGGGAGTGCGGGCGGCTGCGTCCGGGCAGGGTGCAATAGGCAGTCAATGAAAGCACAGCACAGTAATTAACGCAGtgtactgtgtctctccaggccCAGAGCTGCAGACCTTGCTGTACTGTAGATGTCCAGGACATGGAGCTGGAGATCCATTCTTTAACAAGTTAAAAGTGAATAATTGTAGCCAATTAATGACACAAAGGCACTATAATAAACACCAGAGGTCAGAGGGTCACATGGAGCTTACACAGGCTAAAGTTACTAAACTAAACTGTTGTCTTATTCCTGTTTTCCTTGAAATGAAAGTGTTGGGaaggggggggagagggagaggtgccAGGAAGTAATTTCCTTTTCACTAGGCttgggtcaggggtcaggggtcagggagAGGAGGTTGTGAGGCAAAGGGAAGACGTTTTTTCCTAACAATATATTAGTCCACAGATATTTTCATTAAGAAcatcaatgtaattttttattattatttatttcttatatatatttatatataaaaagaatacTCTAAAAAGTTCATGATTTGTTGGAGTTGGACTACAGCAAAGGAGCAGAGACAGGTCTGAAGGTTGTGAACAGCGTGTGTGAAATGTACACAGAGCACAGGCCCCTCCCCTCCACTCAC

Function

NR:

description
PREDICTED: integral membrane protein 2C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147042 True 2232 lncRNA 0.48 1 14736096 14738327

Neighbor

gene id symbol gene type direction distance location
AMCG00018588 bicdl1 coding upstream 4432 14707571 ~ 14731664 (+)
AMCG00018586 LOC107677981,LOC107567443 coding upstream 89264 14630062 ~ 14646832 (+)
AMCG00018585 NA coding upstream 121651 14599262 ~ 14614445 (+)
AMCG00018577 NA coding upstream 148068 14574260 ~ 14588028 (+)
AMCG00018581 NA coding upstream 178296 14554089 ~ 14557800 (+)
AMCG00018593 NA coding downstream 83664 14821991 ~ 14824758 (+)
AMCG00018600 NA coding downstream 93173 14831500 ~ 14834064 (+)
AMCG00018608 cldn5,LOC103357131 coding downstream 188835 14927162 ~ 14927524 (+)
AMCG00018603 ufd1l coding downstream 211309 14949636 ~ 14954263 (+)
AMCG00018611 ppil2 coding downstream 691957 15430284 ~ 15468382 (+)
G117209 NA non-coding upstream 201896 14533963 ~ 14534200 (+)
G117197 NA non-coding upstream 297005 14437992 ~ 14439091 (+)
G117131 NA non-coding upstream 490778 14244708 ~ 14245318 (+)
G117130 NA non-coding upstream 491893 14242864 ~ 14244203 (+)
G116976 NA non-coding upstream 889004 13846890 ~ 13847092 (+)
G117381 NA non-coding downstream 45179 14783506 ~ 14784333 (+)
G117382 NA non-coding downstream 47698 14786025 ~ 14786487 (+)
G117387 NA non-coding downstream 54469 14792796 ~ 14793804 (+)
G117388 NA non-coding downstream 55558 14793885 ~ 14794239 (+)
G117389 NA non-coding downstream 58204 14796531 ~ 14797150 (+)
AMCG00018567 NA other upstream 323817 14408958 ~ 14412279 (+)
AMCG00018564 mlec,LOC106579938 other upstream 336557 14330841 ~ 14399539 (+)
G117178 NA other upstream 388355 14345090 ~ 14347741 (+)
AMCG00018551 NA other upstream 493379 14239242 ~ 14242717 (+)
AMCG00018553 cryba4,LOC106568369,LOC106563090 other upstream 545019 14189003 ~ 14191077 (+)
G117379 rplp0,LOC107701857,LOC107654305,LOC107591459 other downstream 35788 14774115 ~ 14777110 (+)
G117383 NA other downstream 48296 14786623 ~ 14788133 (+)
AMCG00018602 LOC102789415 other downstream 216237 14954564 ~ 14981705 (+)
G117786 LOC101064881,LOC103134930,LOC106938822,LOC106933658,LOC103469853,LOC105937727 other downstream 2329885 17068212 ~ 17069670 (+)
AMCG00018681 NA other downstream 3242813 17981140 ~ 17983017 (+)

Expression


Co-expression Network