G117377


Basic Information

Item Value
gene id G117377
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030135.1
NCBI id CM030135.1
chromosome length 28454832
location 14736138 ~ 14738312 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU147067
GGGCCTGTGCTCTGTGTACATTTCACACACGCTGTTCACAACCTTCAGACCTGTCTCTGCTCCTTTGCTGTAGTCCAACTCCAACAAATCATGAACTTTTTAGAgtattctttttatatataaatatatataagaaataaataataataaaaaattacattgatgTTCTTAATGAAAATATCTGTGGACTAATATATTGTTAGGAAAAAACGTCTTCCCTTTGCCTCACAACCTCCTctccctgacccctgacccctgacccaaGCCTAGTGAAAAGGAAATTACTTCCTggcacctctccctctccccccccttCCCAACACTTTCATTTCAAGGAAAACAGGAATAAGACAACAGTTTAGTTTAGTAACTTTAGCCTGTGTAAGCTCCATGTGACCCTCTGACCTCTGGTGTTTATTATAGTGCCTTTGTGTCATTAATTGGCTACAATTATTCACTTTTAACTTGTTAAAGAATGGATCTCCAGCTCCATGTCCTGGACATCTACAGTACAGCAAGGTCTGCAGCTCTGggcctggagagacacagtacaCTGCGTTAATTACTGTGCTGTGCTTTCATTGACTGCCTATTGCACCCTGCCCGGACGCAGCCGCCCGCACTCCCTCTCCAGCATGACTGTGGGATCTGAGCCATAAGGGAGAGCCTTGCTTGTTCCCCAGAGAGGCTGACTGGCTGATTAGGCTTACATCTCCCCTCCCTACATGGAGCAATCTCCATCAGCGGTGCAGCTCTCCGCAGGGAGGGGAGCCTGGTGTGTTGCGTCTAACAGCAGGGAGAGGGAGCTCCGTTGTTTCTTTGACTCCGATTGGCAGCTCTGTCAGGATCCGGGAGAGGCctgtggtgtgggggggtggccTGTGTTTCGCCTGGCGAGAAGGCACAGAGTGGCAAAGGCAGGGGGGTGCAGAGTAGGAGCAGACTATTGGTGTACTCTGTGGCTATGGGAGTAAAGTGACCATATTGGTTTTGGTAAttctattgttattattaattagtttttttttttttgtttttgttttttacaaatgatgatacacacacccccccccacgcacacacaaaccgtttaatacaaaacataaatagagagagagattttttcaCACTCCAGCTGATTGGCGCTGCCCCCCGGCCCCGCTCTGTGCTGATTGGTGTTTTCTGTCTTGCTCCTGAGCATTTGTTTGTGGAGGTTGTGGGCCGGGGGGGGGGTGGAAGAGGATTTTGCACGGTGATTCACTGGGTCTGAAAGCCCCACCTACCCCACACCCCCCTTCTGCCTGACCCTCCGGGGGGGGATGGGGACGATGACATAAGTCTACGCCACCCCCCCTACAACTTCCCCTGCAGACTCCGCGCTCCAGTGCAACGACACGGGCAACAAGTGGGACGACCCTTCCTATTCCCCCTGACAGAAAATGCATCACCGCCCGGGCGCAGGATGACTCCAGGGTTCCCAGCAAGGGCTGGCCAGGGGGAAGCGGGGGGCTCCTGGCAAAGCTTTCACATCTTGCTCACCCTCACCCCCTTCCCTCTGGTGCCCTTGTCTGTGCATCAGCCTGTATTGCCCCCACCAACAGAAAGCACTGCGGTTAAAAGGCCAGCGTTATCGATATCCTCCTGGGGTTTAAACCTGTGGGACCAAAAACCCAGAAAACAGAAATTCCCACCCCAGGCTCGTCCCCCACCTCCAGTGATTCAGGGCTTTGAACCTACGTGGAACttgaaacacagaaaatacaaatctggGATGAAATGTCTGAGCAGGCCAGGCCTTATTGGGGGGGGGACTGCGTCACGGTGCTGGCACTCCAGCAGAGAcgagagggagagacagtgaCGTGGAAGCGAGGTTCTGGTGGTCAGAGCGGTGGAACGGGATGGTTTACGTGTCAGTATGTGCTGGTCTGTAGAGGGTCTGGAATCACTTGTAAATATTCAGTATTGGACCTTATGCCAAAAAGGCACAGAATTACAGAGCAAAACAAGAATGAGAAAACAACTCAATGGGGAAACTgcaaagttttaaaaaatatttttgtgtgtaaaatatatacatatatatatgtatgcatgtgtatgtatgtgtatatatatatatatatatatatatataataaaaagattGAACCTGTTTTCTCTTTAAACTGTGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU147067 True 2175 TUCP 0.48 1 14736138 14738312

Neighbor

gene id symbol gene type direction distance location
AMCG00018591 NA coding downstream 33892 14648143 ~ 14702246 (-)
AMCG00018592 NA coding downstream 88033 14647092 ~ 14648105 (-)
AMCG00018587 drg1 coding downstream 139900 14591273 ~ 14596238 (-)
AMCG00018584 NA coding downstream 196856 14530002 ~ 14539282 (-)
AMCG00018571 gnaz,LOC107555529,LOC107686467,LOC107744122 coding downstream 275460 14450935 ~ 14460678 (-)
AMCG00018589 rab35,LOC103397428 coding upstream 82 14738394 ~ 14749164 (-)
AMCG00018590 gcn1,LOC107699625,LOC107553027,LOC104958133,LOC107698162,LOC104964287 coding upstream 11967 14750279 ~ 14770330 (-)
AMCG00018596 rplp0 coding upstream 35662 14773974 ~ 14778855 (-)
AMCG00018598 pxn,LOC107748058,LOC107557596,LOC106579946 coding upstream 46068 14784380 ~ 14797365 (-)
AMCG00018594 ctu1 coding upstream 80471 14818783 ~ 14821860 (-)
G117338 NA non-coding downstream 31680 14703640 ~ 14704458 (-)
G117319 NA non-coding downstream 99799 14635404 ~ 14636339 (-)
G117293 NA non-coding downstream 148088 14578236 ~ 14588050 (-)
G117254 NA non-coding downstream 257201 14478095 ~ 14478937 (-)
G117253 NA non-coding downstream 258919 14476990 ~ 14477219 (-)
G117432 NA non-coding upstream 41975 14780287 ~ 14784313 (-)
G117438 NA non-coding upstream 95544 14833856 ~ 14835725 (-)
G117441 NA non-coding upstream 118108 14856420 ~ 14857595 (-)
G117472 NA non-coding upstream 240729 14979041 ~ 14980384 (-)
G117501 NA non-coding upstream 475856 15214168 ~ 15214431 (-)
G117267 ywhag,143g1,ywhag1,LOC106603950,LOC108233911,LOC107387033 other downstream 215263 14503403 ~ 14520875 (-)
AMCG00018555 LOC107689851 other downstream 472984 14242545 ~ 14263154 (-)
AMCG00018528 LOC104956910,LOC107742399,LOC107591749,LOC106595856 other downstream 1008268 13645368 ~ 13727870 (-)
AMCG00018522 NA other downstream 1478888 13253085 ~ 13257250 (-)
AMCG00018490 NA other downstream 2445594 12287568 ~ 12290544 (-)
AMCG00018617 ypel1,YPEL1,ypelc,ypel2b,LOC106931471,LOC103374080,LOC108277989,LOC106586007,LOC106940241 other upstream 760350 15498662 ~ 15518315 (-)
G117784 NA other upstream 2270586 17008898 ~ 17009301 (-)
G117823 NA other upstream 2487778 17226090 ~ 17256271 (-)
G117899 NA other upstream 2865044 17603356 ~ 17603848 (-)
G118075 NA other upstream 3728056 18466368 ~ 18474245 (-)

Expression


Co-expression Network